G2400 (nos2,LOC108432969)


Basic Information

Item Value
gene id G2400
gene name nos2,LOC108432969
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035897.1
NCBI id CM008300.1
chromosome length 26953843
location 8875852 ~ 8882592 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU3179
CATTGCCAAAGGTGCTGGTCACCACTATCAGAAGGCGTTCTTTCTCAAGATCACCAAATCTGTAGTCCTCCATGCAGAGCAGCCTGGGATTGAAGGCACAGCTCAGCATAGACTTAAGCTTTTTGGCAAAAGTCTGAGATTTTCCAGTTTCAGTCGCATATAGAATGGTGCAAGGGACTCTGTTCTCTAAAGCTTTTTGCATGAGAATTTGAGAAAAGACCACAGCCTTTGTCAGTGCTCCAAAGCTAATTCTTTTTCGCTTCTTCAGTCCTTTCTCCTCATCTTTCCAGACATGTGTTAACCAGGGATCAGTCTGGTAGTAGAAGAAAGGGGAGAGGATGTAGCTGATCATCTCCTGGTGGAACACTGGGGTAAGAGAGCCAGACATGGGCGGCACCAGCCAGATCCAGTCTGCAGGACACCCTCCTCGCAGACGCACTTCAGTCTCCATGTGCTTCATGAAGGACTCGGCTGCAGAGTGGTGATCGGTGATGGTCACCTTATTTTTCTGAAAACTATGAATCACAGCAACATTAATGGCAACCAGAGCTTCATCCTTCCACAGTGAGGACAACTTCTGAGTTTCCAAGCCCATATAACAGCCAACCTTCTCCAGAATGTTGTAGCGCTGAGGATCGCAGAAGTCCCTCACTCCAATCTCAGTGCCCATGTACCAGCCATTGAAGGGGCAAGCTGTAAACTCAAGACCACCAATCTCCATCAGCATGTTGGCCACTGCGGGCAGGGCGTACCACCGGAGGTTCAGATCTTTGAACCACTCGTAATGAGGATGCTCCATTTCAACCTCCAATATCAGTTCTGGCGGAATTTCAAACAGTTCAGGATCTTCTCCATTAGCTTGCAGGACCAGTGGCAGCACATCAAAGAGCCCATATTTTGGTGTCCATCCAAGCTGGATACAAAGCTCCGTGAATTCCACACTGGCAGGATCCCCAACCACACTACCATCCTCCATCTGGTAGCCGGCATATTTTATTAGCTGACCGTTCCAAACACGGAAATCGTGCTCCCCATCTGTTCTTTGCGGAAACACAGTGATAGCCGATCTTAAATTTCCTCCATTTGTGGCAAATTTCAGATGAGAGCACATGAACTGGAACATTTCCTTGGCAGTCTTGCAATGGCGAGCATCAAACAGCTGTAAATTAGCCCACTGAATCCGACCAATGCACCTTGGCGCGTTCCTCCATGCCTGTTTGGCTCCAAATGCCAGCTCTTCAGTGGTGAGCTGATAAGTTCCTGTGGCATCGATTTCCTGGGCCACCTCATCAACACGGGCCAAGTGCTCCTCAATTTTAGACGTTTTGAAGGACTTATAGTACTGGTTGATGAAGTCAATGGCCTGAATGAGAAGCTCATTAGGTCCTGGTGGGGTGTTGGCAGGGGAACGAATTAGAGTCTTTGGGTTCATGACTGAGCCTTCACACACTTTGGGTTTGCAGAGCTGATTCTTGATGGCTCTGTGATAAAGTGTGTCTTGGTGGCTGGACCCATTCTGAAAGTTCTTCATTTGCATTGCCATCGGGCAGCGACTGACCTTCTTCTCACTTACCTGCTTCATTATCATACTCCTTCCCGTTCACTTCGATCATCTGACGCCAATCTACTCTCCATTGGTAGAAACAAGCACCGGACCTGGGGCGATAGCTGCCCCCTCCCTGTGGAACTCTCTCCCAAAACACATCCGCGCCTGCTCTGATCTTCCCACTTTTAAATATCTCCTCAAAACTCACCTTTTCAGAGCTGCTTTCAACGCATGATGCAACATTTCTATGAGCCTCTCCCTTTTCCTCTCCTCTACTTTACTTCATCTGTTTTTACTTAttcaatttttaattttctatctTTTATGCATTGATTGTTTTGCTTTATTGATTTCTATTGTATGGtattgatgatgttgatgatgatgatgattattttaatatgtattgtcatattgtgttttttttatgcaatgtaAAGCGTC

Function

symbol description
nos2 Enables nitric-oxide synthase activity. Involved in several processes, including nitric oxide biosynthetic process; prostaglandin secretion; and regulation of gene expression. Located in cytosol and peroxisome. Implicated in several diseases, including dementia (multiple); hypertension (multiple); malaria; pulmonary tuberculosis; and type 2 diabetes mellitus. Biomarker of several diseases, including artery disease (multiple); cystic fibrosis; lung disease (multiple); obesity; and obstructive sleep apnea.

NR:

description
PREDICTED: nitric oxide synthase, inducible

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU3179 True 1990 lncRNA 0.46 13 8875852 8882592

Neighbor

gene id symbol gene type direction distance location
LOC103022607 chrna10a,LOC108432977,LOC107570043,LOC446029,LOC106567906 coding upstream 21651 8846840 ~ 8854201 (+)
LOC103022922 LOC103022922,LOC108277434 coding upstream 36473 8837372 ~ 8839379 (+)
LOC111194918 NA coding upstream 49492 8822490 ~ 8826360 (+)
LOC103023232 NA coding upstream 59165 8807167 ~ 8816687 (+)
LOC111192952 NA coding downstream 57047 8939639 ~ 8940410 (+)
LOC103038411 NA coding downstream 271797 9154389 ~ 9156240 (+)
LOC103045140 wscd1,LOC108432998,LOC107756514,LOC107682602,LOC107666180 coding downstream 525507 9408099 ~ 9463585 (+)
LOC103038783 LOC108432999,LOC108278263,LOC106613073,LOC107589733,LOC107714181,LOC106581277,LOC105901427,LOC107666202 coding downstream 689928 9572520 ~ 9600832 (+)
LOC111192769 NA coding downstream 874244 9756836 ~ 9759186 (+)
G2393 NA non-coding upstream 13105 8857353 ~ 8862747 (+)
G2362 stim1,LOC108277929,LOC108432992,LOC101465674,LOC100691215,LOC102214188 non-coding upstream 88842 8743016 ~ 8787010 (+)
G2328 NA non-coding upstream 245005 8629797 ~ 8630847 (+)
G2326 NA non-coding upstream 247941 8627648 ~ 8627911 (+)
G2174 NA non-coding upstream 996326 7877733 ~ 7879526 (+)
G2443 NA non-coding downstream 291744 9174336 ~ 9174756 (+)
G2453 NA non-coding downstream 433092 9315684 ~ 9316134 (+)
LOC111195023 NA non-coding downstream 503676 9386268 ~ 9394588 (+)
G2464 NA non-coding downstream 516002 9398594 ~ 9399000 (+)
G2466 NA non-coding downstream 581504 9464096 ~ 9465472 (+)
G2358 LOC108432992,LOC101077340,LOC100691215,LOC101465674 other upstream 140900 8732723 ~ 8734952 (+)
G2304 NA other upstream 315374 8560066 ~ 8560478 (+)
LOC103030091 ptbp2,ptbp2b,LOC103030091,LOC108442283,LOC107594658,LOC107718150,LOC107570490,LOC108277987 other upstream 2321402 6513144 ~ 6554450 (+)
rwdd3 rwdd3 other upstream 2461058 6408846 ~ 6414794 (+)
pnkp pnkp,LOC107749649,LOC107672387,LOC107561379,LOC107758514 other upstream 3172669 5681026 ~ 5703183 (+)
lyrm9 lyrm9,LOC102789908 other downstream 61869 8944461 ~ 8957392 (+)
G2509 NA other downstream 749273 9631865 ~ 9670125 (+)
LOC103039705 gdpd5b,gdpd5,LOC103039705,LOC108433002,LOC108277648,LOC107666190,LOC107682503 other downstream 751501 9634093 ~ 9743491 (+)
LOC103029949 slc46a1 other downstream 2375854 11258446 ~ 11279177 (+)
G2910 sarm1,LOC107756984 other downstream 2405539 11288131 ~ 11288846 (+)

Expression


Co-expression Network