G2509


Basic Information

Item Value
gene id G2509
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035897.1
NCBI id CM008300.1
chromosome length 26953843
location 9631865 ~ 9670125 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU3313
cttgacccaaactaaaattgctgagcagctcggcatcagccagtcttccgtctgcaaagctctcaagaaaaactgcagcaagcgcaccaactgttccggcgtccgaaaaacaacaagcagctgagaaagatcgcagtcagcaaccggttcaagtccacttccgagctcaccgacttgtggaacaagcagaccggcgctgacgtctccagatcaaccacttaccgtcgtctgcgcgaactcggcttcaaatctcgcgttccagcagtaaaaccgatgctgaacaagaaacaaatggagaaacggctgaagtgggccaaagaacacggcgagtggactgctgaagactggcagaaagtggtcttcagtgacgaatcatgcttctgcatctccttcggtgaccaaggtcctcgtgtctggcgtcgtggtggcgaaacctacaaccacgagtgcgtgaaaagatccgtcaagtttccccagagcgttatggtctggggatgcatgtccgctcgaggtgtagggaaactctgcttcctcaagaagactgtcaatgctgccgtatatcaagatgttctggaaacgttcctgattccgactgttgaggaacagttcggcgaagaagacttcatatttcaacaggatcttgcaccggctcatgcggcaaagtcgaccaaagattggttcactaaaaaacagcttgaagttttg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU3313 True 705 TUCP 0.41 2 9631865 9670125

Neighbor

gene id symbol gene type direction distance location
LOC103038783 LOC108432999,LOC108278263,LOC106613073,LOC107589733,LOC107714181,LOC106581277,LOC105901427,LOC107666202 coding upstream 31033 9572520 ~ 9600832 (+)
LOC103045140 wscd1,LOC108432998,LOC107756514,LOC107682602,LOC107666180 coding upstream 168280 9408099 ~ 9463585 (+)
LOC103038411 NA coding upstream 475625 9154389 ~ 9156240 (+)
LOC111192952 NA coding upstream 691455 8939639 ~ 8940410 (+)
LOC103022607 chrna10a,LOC108432977,LOC107570043,LOC446029,LOC106567906 coding upstream 777664 8846840 ~ 8854201 (+)
LOC111192769 NA coding downstream 86711 9756836 ~ 9759186 (+)
LOC103041157 NA coding downstream 239427 9909552 ~ 9971315 (+)
LOC103041662 NA coding downstream 321448 9991573 ~ 10006311 (+)
LOC103042389 LOC108444298 coding downstream 504156 10174281 ~ 10192344 (+)
LOC103043114 NA coding downstream 556645 10226770 ~ 10239820 (+)
G2491 NA non-coding upstream 125888 9505710 ~ 9505977 (+)
G2485 NA non-coding upstream 140233 9491380 ~ 9491632 (+)
G2484 NA non-coding upstream 140567 9490620 ~ 9491298 (+)
G2481 NA non-coding upstream 141923 9485560 ~ 9489942 (+)
G2466 NA non-coding upstream 166393 9464096 ~ 9465472 (+)
G2513 hspa13,LOC107682527,LOC107589748 non-coding downstream 81334 9751459 ~ 9752131 (+)
G2539 NA non-coding downstream 94960 9765085 ~ 9765945 (+)
G2543 samsn1 non-coding downstream 101311 9771436 ~ 9772691 (+)
G2547 NA non-coding downstream 111368 9781493 ~ 9782062 (+)
G2554 NA non-coding downstream 137085 9807210 ~ 9819840 (+)
lyrm9 lyrm9,LOC102789908 other upstream 674473 8944461 ~ 8957392 (+)
G2358 LOC108432992,LOC101077340,LOC100691215,LOC101465674 other upstream 896913 8732723 ~ 8734952 (+)
G2304 NA other upstream 1071387 8560066 ~ 8560478 (+)
LOC103030091 ptbp2,ptbp2b,LOC103030091,LOC108442283,LOC107594658,LOC107718150,LOC107570490,LOC108277987 other upstream 3077415 6513144 ~ 6554450 (+)
rwdd3 rwdd3 other upstream 3217071 6408846 ~ 6414794 (+)
LOC103029949 slc46a1 other downstream 1588321 11258446 ~ 11279177 (+)
G2910 sarm1,LOC107756984 other downstream 1618006 11288131 ~ 11288846 (+)
meox2 meox2,LOC103024054,LOC107683451,LOC107730826,LOC107582293,LOC107588208,LOC107704718 other downstream 1735418 11405543 ~ 11424451 (+)
G3096 NA other downstream 2254325 11924450 ~ 11927250 (+)
G3313 sept5b,LOC108425237 other downstream 3312500 12982625 ~ 12984269 (+)

Expression


Co-expression Network