G2565


Basic Information

Item Value
gene id G2565
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035897.1
NCBI id CM008300.1
chromosome length 26953843
location 9959891 ~ 9960450 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU3383
gtgtgtgtgtgcgtgtgtgtatatgtgtatgtgctTGCATGTGTCTATTGAGGGCAAGAGTACAGCATGCAGAGaaatgagaggagagagacagtgtgtgtgtgtgtgtgtgtgggtggtgaGGTTACTGCAGGTTTAATGGTGACCTTGTTGTGCGTGCACTTAGCTGCTATTCAGCGCTGGGCTGCACTGAGCGAGCCCTCTAATCCCACACTGTAGGACACACACACTTGATTAGTGGCGGTGGTTATCTGCACAGAGGACAAAACTGCTGACCTCGGTGTACCGGTCATTACTGGGCCACACCGAGGTGTCAACCACACACACGCAGAGAGAGGAGCACAAAGAAACAGTGACacagagaaagaacaaaaactaATAGAgagacacatatatatatatcagagatAGAGAtcagagacacacacatatattatatatatatatatatatacatatgtatattgttggtgcacgtcttgctggcgcatctgttagcaagacagcaagtct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU3383 True 513 lncRNA 0.32 2 9959891 9960450

Neighbor

gene id symbol gene type direction distance location
LOC111192769 NA coding upstream 200705 9756836 ~ 9759186 (+)
LOC103038783 LOC108432999,LOC108278263,LOC106613073,LOC107589733,LOC107714181,LOC106581277,LOC105901427,LOC107666202 coding upstream 359059 9572520 ~ 9600832 (+)
LOC103045140 wscd1,LOC108432998,LOC107756514,LOC107682602,LOC107666180 coding upstream 496306 9408099 ~ 9463585 (+)
LOC103038411 NA coding upstream 803651 9154389 ~ 9156240 (+)
LOC111192952 NA coding upstream 1019481 8939639 ~ 8940410 (+)
LOC103041662 NA coding downstream 31123 9991573 ~ 10006311 (+)
LOC103042389 LOC108444298 coding downstream 213831 10174281 ~ 10192344 (+)
LOC103043114 NA coding downstream 266320 10226770 ~ 10239820 (+)
LOC103043417 NA coding downstream 526036 10486486 ~ 10499361 (+)
LOC103042748 LOC103042748,LOC108426910,LOC105898201,LOC104922853 coding downstream 1125005 11085455 ~ 11089687 (+)
G2563 NA non-coding upstream 41888 9916144 ~ 9918003 (+)
G2561 NA non-coding upstream 104032 9854739 ~ 9855859 (+)
G2560 NA non-coding upstream 105727 9853932 ~ 9854164 (+)
G2559 NA non-coding upstream 112050 9847002 ~ 9847841 (+)
G2554 NA non-coding upstream 140051 9807210 ~ 9819840 (+)
G2567 NA non-coding downstream 19224 9979674 ~ 9979956 (+)
G2592 NA non-coding downstream 107069 10067519 ~ 10068311 (+)
LOC111195257 NA non-coding downstream 143787 10104237 ~ 10120596 (+)
G2577 NA non-coding downstream 160180 10120630 ~ 10123738 (+)
G2627 NA non-coding downstream 173458 10133908 ~ 10156173 (+)
LOC103039705 gdpd5b,gdpd5,LOC103039705,LOC108433002,LOC108277648,LOC107666190,LOC107682503 other upstream 216400 9634093 ~ 9743491 (+)
G2509 NA other upstream 289766 9631865 ~ 9670125 (+)
lyrm9 lyrm9,LOC102789908 other upstream 1002499 8944461 ~ 8957392 (+)
G2358 LOC108432992,LOC101077340,LOC100691215,LOC101465674 other upstream 1224939 8732723 ~ 8734952 (+)
G2304 NA other upstream 1399413 8560066 ~ 8560478 (+)
LOC103029949 slc46a1 other downstream 1297996 11258446 ~ 11279177 (+)
G2910 sarm1,LOC107756984 other downstream 1327681 11288131 ~ 11288846 (+)
meox2 meox2,LOC103024054,LOC107683451,LOC107730826,LOC107582293,LOC107588208,LOC107704718 other downstream 1445093 11405543 ~ 11424451 (+)
G3096 NA other downstream 1964000 11924450 ~ 11927250 (+)
G3313 sept5b,LOC108425237 other downstream 3022175 12982625 ~ 12984269 (+)

Expression


Co-expression Network