G2567


Basic Information

Item Value
gene id G2567
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035897.1
NCBI id CM008300.1
chromosome length 26953843
location 9979674 ~ 9979956 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU3385
ctagaatgtcagctgaagacttacagaaatctctggcacatgctaacatttgtgttgacaaatctacaataaggaaaacattaaacaagaatggagttaaTGGAAGaacaccacggaggaagccactgctgtccaaaaaaaaaactttactgcacgtttgaagtttgcaaaggagcacctggatgttccacagcagtactggctaaatatactgtggacagatgaaaccaaaattgagttgtttgaaaggaacacacacaacaaaaaagCACAGGACACCATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU3385 True 283 lncRNA 0.38 1 9979674 9979956

Neighbor

gene id symbol gene type direction distance location
LOC103041157 NA coding upstream 8359 9909552 ~ 9971315 (+)
LOC111192769 NA coding upstream 220488 9756836 ~ 9759186 (+)
LOC103038783 LOC108432999,LOC108278263,LOC106613073,LOC107589733,LOC107714181,LOC106581277,LOC105901427,LOC107666202 coding upstream 378842 9572520 ~ 9600832 (+)
LOC103045140 wscd1,LOC108432998,LOC107756514,LOC107682602,LOC107666180 coding upstream 516089 9408099 ~ 9463585 (+)
LOC103038411 NA coding upstream 823434 9154389 ~ 9156240 (+)
LOC103041662 NA coding downstream 11617 9991573 ~ 10006311 (+)
LOC103042389 LOC108444298 coding downstream 194325 10174281 ~ 10192344 (+)
LOC103043114 NA coding downstream 246814 10226770 ~ 10239820 (+)
LOC103043417 NA coding downstream 506530 10486486 ~ 10499361 (+)
LOC103042748 LOC103042748,LOC108426910,LOC105898201,LOC104922853 coding downstream 1105499 11085455 ~ 11089687 (+)
G2565 NA non-coding upstream 19224 9959891 ~ 9960450 (+)
G2563 NA non-coding upstream 61671 9916144 ~ 9918003 (+)
G2561 NA non-coding upstream 123815 9854739 ~ 9855859 (+)
G2560 NA non-coding upstream 125510 9853932 ~ 9854164 (+)
G2559 NA non-coding upstream 131833 9847002 ~ 9847841 (+)
G2592 NA non-coding downstream 87563 10067519 ~ 10068311 (+)
LOC111195257 NA non-coding downstream 124281 10104237 ~ 10120596 (+)
G2577 NA non-coding downstream 140674 10120630 ~ 10123738 (+)
G2627 NA non-coding downstream 153952 10133908 ~ 10156173 (+)
G2644 NA non-coding downstream 233226 10213182 ~ 10213417 (+)
LOC103039705 gdpd5b,gdpd5,LOC103039705,LOC108433002,LOC108277648,LOC107666190,LOC107682503 other upstream 236183 9634093 ~ 9743491 (+)
G2509 NA other upstream 309549 9631865 ~ 9670125 (+)
lyrm9 lyrm9,LOC102789908 other upstream 1022282 8944461 ~ 8957392 (+)
G2358 LOC108432992,LOC101077340,LOC100691215,LOC101465674 other upstream 1244722 8732723 ~ 8734952 (+)
G2304 NA other upstream 1419196 8560066 ~ 8560478 (+)
LOC103029949 slc46a1 other downstream 1278490 11258446 ~ 11279177 (+)
G2910 sarm1,LOC107756984 other downstream 1308175 11288131 ~ 11288846 (+)
meox2 meox2,LOC103024054,LOC107683451,LOC107730826,LOC107582293,LOC107588208,LOC107704718 other downstream 1425587 11405543 ~ 11424451 (+)
G3096 NA other downstream 1944494 11924450 ~ 11927250 (+)
G3313 sept5b,LOC108425237 other downstream 3002669 12982625 ~ 12984269 (+)

Expression


Co-expression Network