G2665


Basic Information

Item Value
gene id G2665
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035897.1
NCBI id CM008300.1
chromosome length 26953843
location 10412524 ~ 10413014 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU3493
ctgaaatctaaaaacttttggttaaatgttgaaatctaaaaacttttggttaaatgctgaaatctaaaacttttggttacatgctgaaatctaaaaactttccaggtggttgctaaggtgttgctatagtatccggggtggttgctaaggtgttgctaggtggttgctaaggtgttgctatggtatccagggtggttgctaaggtgttgctaggtggttgctaaggtgttgctatggtatccagggtggttgctaaggtgttgctaggtggttgctaggtggttgctaaggtgttgctatggtatccagggtggttgctaaggtgttgctatggtatccagggtggttgctaaggtgttgctaggtggttgctaggtggttgctaaggtgttgctaggtggttgctaaggtgttgctatggtatcc

Function

NR:

description
PREDICTED: cysteine-rich motor neuron 1 protein isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU3493 True 426 lncRNA 0.45 2 10412524 10413014

Neighbor

gene id symbol gene type direction distance location
LOC103043114 NA coding upstream 172704 10226770 ~ 10239820 (+)
LOC103042389 LOC108444298 coding upstream 220180 10174281 ~ 10192344 (+)
LOC103041662 NA coding upstream 406213 9991573 ~ 10006311 (+)
LOC103041157 NA coding upstream 441209 9909552 ~ 9971315 (+)
LOC111192769 NA coding upstream 653338 9756836 ~ 9759186 (+)
LOC103043417 NA coding downstream 73472 10486486 ~ 10499361 (+)
LOC103042748 LOC103042748,LOC108426910,LOC105898201,LOC104922853 coding downstream 672441 11085455 ~ 11089687 (+)
unc119 unc119,LOC103043060,LOC107704800,LOC107548572,LOC107713212 coding downstream 679143 11092157 ~ 11116667 (+)
LOC111195540 cdkl1,LOC108424097 coding downstream 844727 11257741 ~ 11258661 (+)
ankmy2 ankmy2,ankmy2a,LOC107582236,LOC107586949,LOC107704763,LOC107683262,LOC107730870 coding downstream 883555 11296569 ~ 11303882 (+)
G2654 NA non-coding upstream 120009 10291699 ~ 10292515 (+)
G2644 NA non-coding upstream 199107 10213182 ~ 10213417 (+)
G2627 NA non-coding upstream 256351 10133908 ~ 10156173 (+)
G2577 NA non-coding upstream 288786 10120630 ~ 10123738 (+)
LOC111195257 NA non-coding upstream 291928 10104237 ~ 10120596 (+)
G2781 NA non-coding downstream 168187 10581201 ~ 10581668 (+)
G2821 NA non-coding downstream 294164 10707178 ~ 10707408 (+)
G2822 NA non-coding downstream 294540 10707554 ~ 10707843 (+)
G2828 NA non-coding downstream 334887 10747901 ~ 10748525 (+)
G2836 NA non-coding downstream 370790 10783804 ~ 10784140 (+)
LOC103039705 gdpd5b,gdpd5,LOC103039705,LOC108433002,LOC108277648,LOC107666190,LOC107682503 other upstream 669033 9634093 ~ 9743491 (+)
G2509 NA other upstream 742399 9631865 ~ 9670125 (+)
lyrm9 lyrm9,LOC102789908 other upstream 1455132 8944461 ~ 8957392 (+)
G2358 LOC108432992,LOC101077340,LOC100691215,LOC101465674 other upstream 1677572 8732723 ~ 8734952 (+)
G2304 NA other upstream 1852046 8560066 ~ 8560478 (+)
LOC103029949 slc46a1 other downstream 845432 11258446 ~ 11279177 (+)
G2910 sarm1,LOC107756984 other downstream 875117 11288131 ~ 11288846 (+)
meox2 meox2,LOC103024054,LOC107683451,LOC107730826,LOC107582293,LOC107588208,LOC107704718 other downstream 992529 11405543 ~ 11424451 (+)
G3096 NA other downstream 1511436 11924450 ~ 11927250 (+)
G3313 sept5b,LOC108425237 other downstream 2569611 12982625 ~ 12984269 (+)

Expression


Co-expression Network