G2856


Basic Information

Item Value
gene id G2856
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035897.1
NCBI id CM008300.1
chromosome length 26953843
location 10997768 ~ 10998099 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU3723
AATTGAAACACCAGACAGATAGGGGTGACGCTTGCCgaataaaaggtaaagactggtttatttacagagccgTAAACAGAATAACACAGCCAGATAACAGATCGAACAGAACTCACAGTATAAACAGAAGACGTAGTACAGGAAACAGTCCAAGATCCgaagccagagagacagtccgataatacaacaaatccgataagggcaaagacaaaaggcaaaatccgtaatacagaaaaaagggtcataacaaaagggcaggcagaaaaaggtttggaaaaacgctcagtacgcaacatgagtcgGCAATACCTCGCAAAGAACATATGCTAACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU3723 True 332 lncRNA 0.57 1 10997768 10998099

Neighbor

gene id symbol gene type direction distance location
LOC103043417 NA coding upstream 498407 10486486 ~ 10499361 (+)
LOC103043114 NA coding upstream 757948 10226770 ~ 10239820 (+)
LOC103042389 LOC108444298 coding upstream 805424 10174281 ~ 10192344 (+)
LOC103041662 NA coding upstream 991457 9991573 ~ 10006311 (+)
LOC103041157 NA coding upstream 1026453 9909552 ~ 9971315 (+)
LOC103042748 LOC103042748,LOC108426910,LOC105898201,LOC104922853 coding downstream 87356 11085455 ~ 11089687 (+)
unc119 unc119,LOC103043060,LOC107704800,LOC107548572,LOC107713212 coding downstream 94058 11092157 ~ 11116667 (+)
LOC111195540 cdkl1,LOC108424097 coding downstream 259642 11257741 ~ 11258661 (+)
ankmy2 ankmy2,ankmy2a,LOC107582236,LOC107586949,LOC107704763,LOC107683262,LOC107730870 coding downstream 298470 11296569 ~ 11303882 (+)
sostdc1 sostdc1 coding downstream 316873 11314972 ~ 11319136 (+)
G2854 NA non-coding upstream 2959 10994593 ~ 10994809 (+)
G2844 NA non-coding upstream 105648 10837441 ~ 10892120 (+)
G2836 NA non-coding upstream 213628 10783804 ~ 10784140 (+)
G2828 NA non-coding upstream 249243 10747901 ~ 10748525 (+)
G2822 NA non-coding upstream 289925 10707554 ~ 10707843 (+)
G2860 NA non-coding downstream 71936 11070035 ~ 11070944 (+)
G2896 NA non-coding downstream 163316 11161415 ~ 11161630 (+)
G2902 NA non-coding downstream 270806 11268905 ~ 11269166 (+)
G2907 NA non-coding downstream 283157 11281256 ~ 11281961 (+)
G2918 NA non-coding downstream 314282 11312381 ~ 11312608 (+)
LOC103039705 gdpd5b,gdpd5,LOC103039705,LOC108433002,LOC108277648,LOC107666190,LOC107682503 other upstream 1254277 9634093 ~ 9743491 (+)
G2509 NA other upstream 1327643 9631865 ~ 9670125 (+)
lyrm9 lyrm9,LOC102789908 other upstream 2040376 8944461 ~ 8957392 (+)
G2358 LOC108432992,LOC101077340,LOC100691215,LOC101465674 other upstream 2262816 8732723 ~ 8734952 (+)
G2304 NA other upstream 2437290 8560066 ~ 8560478 (+)
LOC103029949 slc46a1 other downstream 260347 11258446 ~ 11279177 (+)
G2910 sarm1,LOC107756984 other downstream 290032 11288131 ~ 11288846 (+)
meox2 meox2,LOC103024054,LOC107683451,LOC107730826,LOC107582293,LOC107588208,LOC107704718 other downstream 407444 11405543 ~ 11424451 (+)
G3096 NA other downstream 926351 11924450 ~ 11927250 (+)
G3313 sept5b,LOC108425237 other downstream 1984526 12982625 ~ 12984269 (+)

Expression


Co-expression Network