meox2 (meox2,LOC103024054,LOC107683451,LOC107730826,LOC107582293,LOC107588208,LOC107704718)


Basic Information

Item Value
gene id meox2
gene name meox2,LOC103024054,LOC107683451,LOC107730826,LOC107582293,LOC107588208,LOC107704718
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035897.1
NCBI id CM008300.1
chromosome length 26953843
location 11405543 ~ 11424451 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU3862
TTATACAATGGAAAACATATTATTTGGCTCTTTAATATCACCAAAAAGAGTTCCACTATTGTTATGAGGTAAACAATTCCAGTATAATAGAAAACCCATTTTTGTTAGAGCATACATTAAACATAACAATATAAAacctcaaatcagaaaaagttgaaaCTGAGTGcaaacccaagatatttcatcatacataaatatacatccTTTTCATCCAATTCTGTACTTTTAATAACACTGTTTTCTCACAAAGGAACTGAACTGAAAACTGAACACCTGTGATCTCTGTAGTGGAAATGCATTAGGaactgttatttattaatagCTTATAGAACCACATGGACAAGGGATTACTTTGGCCAACCaaataacactttttaacagtataaaGAGAAGCCATATATTAACCATACCCAGAACTGGTGTCAACCTCAAGTAGGGCTAAGaggcattaaaaaacagggtctGTCATGGTGTAGGGTTGTGTCAGTACTCTTCGGTAATGGCAGCATTGATGCAGGAAGATCTTTCCAGGGATGTCTgtacatttttcaacaagaaaataaaaaaatgctacacATTTTATAAGGGCATGGCTGTggaggaagaaggaaaaagtAACAAG
>XM_007232337.3
CCCAGCCTCAGCCCTGGGTGCTTTGAGGAAGCACCTTCCCCTCCCGTCTCGCTCTGCTCCACACTCAGCTCCAGCCCGTCATCCAGCATTCAACTCTCACACTCTCCTCAGctactcctgctgctgctgctgctgctgctgctgagccaGGGACTGCTGCTGTTTACCCAGCGCCGCCTGACAGCCCTCGCCTGTGCCACGCTCTGGAttatcacatacacacacttggGCAgagagccacacacacacacacacacatagagacaCATAGAGACACATGTATATATGCACACACTTTACTCTGCGCTATACTTTTTGAGCTTGTTGTTTAGGACACCCTTTATGAAGTGAGAAGAAATCTACTGGAATTTTTGCTGGAAGTTTTGGACCGGGATCTTTCTGACTTTGGAAGAGGAAAGACTTTGGGTCTGTCTGTGTTTACATCTCTAGAGGcgtgtaaaaagattttttctccttttctttcagTTTTCAAAAGATCCAACATCATTTGTTCATTTCGTAGACAGTGTGTGAGCTCGAAATCAAGCTAATGACAGATTTATCTTAGACACCAATTAGTCTTATTACTTTGCAGGACATATTTTATGAAGTGAAGCAggaattttttaaagtttttttaactttatttattagctcTTACTATTAAGGCTGAGCCTCTGCTTTGGGgtgttttttgattttttgtagttttaatttttttaaatgaggagATAAAGTCTCGTTTGGGTGTTTAGGTTTGTTCTTTTGCATGCAATGGATCACAGTCTGTTCGGCTGCCTGCGCGGCCCCCACGCCCCCCCTCAGGCCCTGCACCCGGCCTTTGCCCTGCACGGACGCTCCGAGCACCTCTCCTACCCTGACCTTTCCTCGTCCTCCTGTATCGTGAGTGGTTACCCAGGTCAGGATGGGCTCTTCGGGGTCCACGGGCACCAGCGTGGACCCcccattaccgagcagcatcacccTCCACCCCAGCCCCAGCAGAGCAGCTGGCACATCCCGCAAATGCCCAGCGCCTCTTCGGCCAGTTCCCGCCTGGGCCTGGGCATGACAGGTCCTGACTCGGGCTCCTCAGACATGTCCCCCGGGGGGCCCAGCCTGTGTGCCAGCACTCCCAGCCTGGCTGGAGCCGTGCCCTCCGGGGCCTCCTGCCTGCCGGGTGGAGATTTTGGGCGGCAGACGCTGTCTCCAGCTGAGGCAGAGAAGAGGAACGGCAAGCGGAGGAGTGACAGCTCAGAATCCCAAGATGGGAATTACAAATCAGACACGAGTAGCAAACCCCGCAAGGAGCGGACGGCGTTCACCAAGGAGCAGATCCGCGAGCTGGAGGCAGAATTTGCTCATCACAACTATTTGACCAGACTGCGGCGTTACGAAATAGCAGTAAACCTGGATCTCACAGAAAGGCAGGTGAAAGTGTGGTTTCAGAACAGACGCATGAAGTGGAAGAGAGTGAAGGGTGGACAGCAGGGGGCGGTGGCCAGGGAGAAGGAACTGGTGAATGTGAAAAAGGGGACCTTGCTGCCTTCAGAGTTCTCGGGCATCGTTGGACTCCACCACACAGCGGACTCCTTGGTCAATGAGGACAGTCATGACAGTGACCAGAGCTCTGAGCATGCTCAGTTATGATACAGAGTAGACACACTTGTGCCTGAGATGTGGATTTGTTGCTACAGTGGCTAAAGGTGGTCGAGGCTgctctttttttaatggagaGACTGAAAATAGGTCAGCAGGTCAGGGCCTCTAATCCCTGGGAAGGAAGACTGTGCCCCATGTCTTCTCTCAGGAACGTCCCTATAAGGACTGCTGTTAGCTGATAGCTTAGCGACAACGTGTATGTGCACATGTACAAAGAACTGATGAAACTGTGTAGAAACTGACCCATGACAATGCAAAAAACGTACACAGTCTTTATGGCAGGACTGTGCCATATACAGTACTTTGGTATTAGGAGGCTAAAATACATTTCATGGTTATCAGATGAGTGTCAAAGTGCCTTGTCATAAAATGACAGTCAAACAGAGTTTGCAGGCTGAATATTGAATTGCTGAAGAGAATATGCATCATATGTTTCATGTACATGAACAAtcttaaagagtttaaaagatTTTGTTCTGTAAAAATCAGATTGACCCATTTTTCCCCTCAGATTTTGGCTGATTATCTGTGTTCAGGGTAAAGCAGAAAGGATTTTGCACTGGAGCCAGGCGGCTAACATGTGATGGAAATCTGTGTCACCCAAAACCTTTTGGGTGGCAAAGACTTCCACTGgggacttttattatattagatgtaatataataaaagtcaGTAATAGATTTTATATGTCTCGTTAAATTGTTCTATTATACAATGGAAAACATATTATTTGGCTCTTTAATATCACCAAAAAGAGTTCCACTATTGTTATGAGGTAAACAATTCCAGTATAATAGAAAACCCATTTTTGTTAGAGCATACATTAAACATAACAATATAAAacctcaaatcagaaaaagttgaaaCTGAGTGcaaacccaagatatttcatcatacataaatatacatccTTTTCATCCAATTCTGTACTTTTAATAACACTGTTTTCTCACAAAGGAACTGAACTGAAAACTGAACACCTGTGATCTCTGTAGTGGAAATGCATTAGGaactgttatttattaatagCTTATAGAACCACATGGACAAGGGATTACTTTGGCCAACCaaataacactttttaacagtataaaGAGAAGCCATATATTAACCATACCCAGAACTGGTGTCAACCTCAAGTAGGGCTAAGaggcattaaaaaacagggtctGTCATGGTGTAGGGTTGTGTCAGTACTCTTCGGTAATGGCAGCATTGATGCAGGAAGATCTTTCCAGGGATGTCTgtacatttttcaacaagaaaataaaaaaatgctacacATTTTATAAGGGCATGGCTGTggaggaagaaggaaaaagtAACAAGATACTGTAACGTTGTACACGATAAGATGCATTTGCAAAAGGAATGGGACAAAATTAATGCCACTGTGTGCCAAGTTTTCTTTGCCAAGTGTGGTACGTAAGAATAGCAACAATACAAAgtggtaaatattttttttggaatgtgttgcaggcctgttGCTCAGACAAAACATGAGATATTTTGAgttattacttttaattttatttgcattttccattctgtcccaacttttgtctgatttggggttgaatatacagtacca

Function

symbol description
meox2 Enables DNA-binding transcription activator activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Involved in negative regulation of cell migration involved in sprouting angiogenesis and positive regulation of transcription by RNA polymerase II. Located in cytoplasm and nucleus.

NR:

description
homeobox protein MOX-2

GO: NA

KEGG:

id description
K09322 MEOX, MOX; homeobox protein MOX

RNA

RNA id representative length rna type GC content exon number start site end site
TU3862 False 622 lncRNA 0.62 1 11423568 11424189
XM_007232337.3 True 3253 mRNA 0.45 3 11405543 11424451

Neighbor

gene id symbol gene type direction distance location
ispd ispd coding upstream 41218 11320363 ~ 11364325 (+)
sostdc1 sostdc1 coding upstream 86407 11314972 ~ 11319136 (+)
ankmy2 ankmy2,ankmy2a,LOC107582236,LOC107586949,LOC107704763,LOC107683262,LOC107730870 coding upstream 101661 11296569 ~ 11303882 (+)
LOC111195540 cdkl1,LOC108424097 coding upstream 146882 11257741 ~ 11258661 (+)
unc119 unc119,LOC103043060,LOC107704800,LOC107548572,LOC107713212 coding upstream 288876 11092157 ~ 11116667 (+)
agmo agmo coding downstream 7512 11431963 ~ 11495096 (+)
etv1 etv1,LOC107683220,LOC107730861 coding downstream 80920 11505371 ~ 11610772 (+)
vwde vwde coding downstream 308478 11732929 ~ 11767714 (+)
LOC103026019 lsr,LOC108427013 coding downstream 366580 11791031 ~ 11805598 (+)
LOC103031217 mag,LOC108427016,LOC108277883,LOC107752306,LOC107683144,LOC107587088,LOC107704773 coding downstream 385724 11810175 ~ 11843921 (+)
G2918 NA non-coding upstream 92935 11312381 ~ 11312608 (+)
G2907 NA non-coding upstream 123582 11281256 ~ 11281961 (+)
G2902 NA non-coding upstream 136377 11268905 ~ 11269166 (+)
G2896 NA non-coding upstream 243913 11161415 ~ 11161630 (+)
G2860 NA non-coding upstream 334599 11070035 ~ 11070944 (+)
G2970 NA non-coding downstream 100194 11524645 ~ 11536611 (+)
G2969 NA non-coding downstream 150500 11574951 ~ 11612299 (+)
G2979 NA non-coding downstream 202147 11626598 ~ 11627779 (+)
LOC111192815 NA non-coding downstream 204835 11629286 ~ 11630831 (+)
LOC111195845 arl4a,arl4aa non-coding downstream 274106 11698557 ~ 11711348 (+)
G2910 sarm1,LOC107756984 other upstream 116697 11288131 ~ 11288846 (+)
LOC103029949 slc46a1 other upstream 126366 11258446 ~ 11279177 (+)
LOC103039705 gdpd5b,gdpd5,LOC103039705,LOC108433002,LOC108277648,LOC107666190,LOC107682503 other upstream 1662052 9634093 ~ 9743491 (+)
G2509 NA other upstream 1735418 9631865 ~ 9670125 (+)
lyrm9 lyrm9,LOC102789908 other upstream 2448151 8944461 ~ 8957392 (+)
G3096 NA other downstream 499999 11924450 ~ 11927250 (+)
G3313 sept5b,LOC108425237 other downstream 1558174 12982625 ~ 12984269 (+)
LOC103035587 NA other downstream 2793356 14217807 ~ 14244380 (+)
LOC103039352 nova2,LOC103039352,LOC108440380,LOC108277822,LOC107669728,LOC107589717,LOC107756760,LOC107379798 other downstream 3020107 14444558 ~ 14505015 (+)
LOC107197063 capns1,LOC108425806,LOC105901516,LOC107700232,LOC107548486 other downstream 3415842 14840293 ~ 14845626 (+)

Expression


Co-expression Network