G4346


Basic Information

Item Value
gene id G4346
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035897.1
NCBI id CM008300.1
chromosome length 26953843
location 17189032 ~ 17189246 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU5877
tttagatagggcttaaagaaGGTTGAagagaaataatgggatagaggagtgaaggaggggaagaaggaaatgaggttagaagtagttagttagttagaggtgttaggagagtaagtgctctttgaagagctctgtcttcaggagtttattaaagatagcgagagattctcctgatctggtagtagaaggtagttagttagaggtgttaggagagt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU5877 True 215 lncRNA 0.40 1 17189032 17189246

Neighbor

gene id symbol gene type direction distance location
LOC111192859 sae1,LOC107718284 coding upstream 497273 16689234 ~ 16691759 (+)
LOC103044410 klc3,LOC108425834,LOC107601696,LOC107743695 coding upstream 545212 16633323 ~ 16643820 (+)
mark4 mark4,si:dkey-31m14.7,LOC107585548 coding upstream 571102 16561486 ~ 16617930 (+)
LOC107197545 NA coding upstream 646589 16538471 ~ 16542443 (+)
LOC103030966 NA coding upstream 652509 16531349 ~ 16536523 (+)
lsamp lsamp coding downstream 265104 17454350 ~ 17873816 (+)
LOC111192370 NA coding downstream 828513 18017759 ~ 18022389 (+)
LOC103030597 LOC108412477 coding downstream 935448 18124694 ~ 18131953 (+)
sidt2 sidt2 coding downstream 948778 18138024 ~ 18166677 (+)
LOC103032687 gmfg,LOC103032687,LOC108277844,LOC107757325,LOC107679065,LOC107090391 coding downstream 1061677 18250923 ~ 18256343 (+)
G4337 NA non-coding upstream 31181 17157644 ~ 17157851 (+)
G4334 NA non-coding upstream 33936 17154760 ~ 17155096 (+)
G4331 NA non-coding upstream 43827 17144921 ~ 17145205 (+)
G4277 NA non-coding upstream 507813 16679405 ~ 16681219 (+)
G4214 NA non-coding upstream 708380 16480335 ~ 16480652 (+)
G4401 NA non-coding downstream 158416 17347662 ~ 17348010 (+)
G4406 NA non-coding downstream 177601 17366847 ~ 17367251 (+)
G4420 NA non-coding downstream 260148 17449394 ~ 17513800 (+)
G4451 NA non-coding downstream 658518 17847764 ~ 17851443 (+)
G4456 NA non-coding downstream 693342 17882588 ~ 17921005 (+)
G4219 ckm,ckmb,ckma,LOC107690449,LOC107683830,LOC107601735,LOC107743697,LOC107718278 other upstream 565963 16619046 ~ 16623069 (+)
G4221 NA other upstream 643178 16542942 ~ 16545854 (+)
LOC103040601 NA other upstream 1362929 15781638 ~ 15826103 (+)
LOC103023550 nf1 other upstream 2026076 15072840 ~ 15162956 (+)
G3790 NA other upstream 2150118 15038555 ~ 15038914 (+)
LOC103039709 NA other downstream 820932 18010178 ~ 18012103 (+)
LOC103034503 efhd1,LOC103034503,LOC107669899,LOC107741634,LOC107585735,LOC107564379 other downstream 852043 18041289 ~ 18422356 (+)
G4550 sik3 other downstream 882718 18071964 ~ 18073663 (+)
G4612 NA other downstream 1570129 18759375 ~ 18759858 (+)
G4775 LOC108411134 other downstream 1971485 19160731 ~ 19165631 (+)

Expression


Co-expression Network