G4994


Basic Information

Item Value
gene id G4994
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035897.1
NCBI id CM008300.1
chromosome length 26953843
location 20703760 ~ 20704500 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU6703
gaaggtacaccagcagctcattataGAGAAcagcaaagttattttattctttattctgtttattgttgatgtgaaAAAACTGCAGTGCATATGTGCACAgagctcctgcatggctaagataggattgggcgactgactgttgactgttgtcagggttttaattagtCAATAGAGCACCTGTATTTCttgccgccaagatagaaacacgccagatatttacttgaacacacctcacttccagaccaccacacccatcagtgtagatttattcctaatgttttgacgctattttaacggcacGGGCACAAGACGTGAAAATAGAcagttgacggggtgTAAGTCTGCGCTAAGCTACGCTGCCACCATTGGAGAATTGGAGAAATGCCTTTGAGCAGGGAGCTTAACCCTCTTCAGGGACAGAGGGAAAATGTGGACCATCTAGACGTCCCAGAGGAcctgtttgagaaccactgctctaTTTTTGAGAGTGTACTTTGCTGTGAAGTTGGAGCGCACACTTCTTGCCTCAGCAATGGGAACAATAAGAGCTAAAGAGATCGTTTATTGTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU6703 True 570 lncRNA 0.44 2 20703760 20704500

Neighbor

gene id symbol gene type direction distance location
LOC111192490 LOC108277610 coding upstream 14403 20671727 ~ 20689357 (+)
eif4g1 LOC108280304,LOC103370583 coding upstream 65812 20585146 ~ 20637948 (+)
LOC111192969 NA coding upstream 128333 20571402 ~ 20575427 (+)
LOC111192413 NA coding upstream 146102 20555459 ~ 20557658 (+)
LOC103036360 NA coding upstream 155329 20545540 ~ 20548431 (+)
LOC103033175 NA coding downstream 27785 20732285 ~ 20740993 (+)
LOC103030875 LOC108413394,LOC108278199 coding downstream 303621 21008121 ~ 21086736 (+)
LOC103042479 ecel1 coding downstream 485241 21189741 ~ 21245822 (+)
LOC103042160 LOC108412514 coding downstream 544353 21248853 ~ 21261198 (+)
clpb clpb,LOC107568463,LOC108261447,LOC108276567 coding downstream 1120427 21824927 ~ 21890977 (+)
G4951 NA non-coding upstream 217595 20485825 ~ 20486165 (+)
G4949 NA non-coding upstream 249267 20452126 ~ 20454493 (+)
G4940 NA non-coding upstream 318505 20384764 ~ 20385255 (+)
LOC111192871 NA non-coding upstream 323465 20379244 ~ 20380295 (+)
G4932 NA non-coding upstream 398835 20304689 ~ 20304925 (+)
G5003 NA non-coding downstream 52675 20757175 ~ 20762971 (+)
G5012 NA non-coding downstream 178311 20882811 ~ 20883093 (+)
G5028 NA non-coding downstream 277743 20982243 ~ 20982748 (+)
G5036 NA non-coding downstream 383474 21087974 ~ 21160121 (+)
LOC103030556 NA non-coding downstream 557235 21261735 ~ 21269163 (+)
LOC103037169 NA other upstream 120886 20558523 ~ 20582874 (+)
LOC107197594 NA other upstream 152125 20549191 ~ 20551635 (+)
G4775 LOC108411134 other upstream 1538129 19160731 ~ 19165631 (+)
G4612 NA other upstream 1943902 18759375 ~ 18759858 (+)
LOC103034503 efhd1,LOC103034503,LOC107669899,LOC107741634,LOC107585735,LOC107564379 other upstream 2281404 18041289 ~ 18422356 (+)
G5026 NA other downstream 279207 20983707 ~ 20999200 (+)
LOC103022859 fgf12,fgf12b,fgf12a,LOC108411839,LOC108278337,LOC107689585,LOC108436038 other downstream 1352022 22056522 ~ 22154926 (+)
LOC103043812 gria4a,gria4,LOC107725765,LOC107670112,LOC107689577,LOC107566895,LOC107560842,LOC107756206,LOC107756230 other downstream 1703056 22407556 ~ 22524746 (+)
LOC103041654 chordc1,LOC108412466 other downstream 1938110 22642610 ~ 22673984 (+)
LOC103045948 grm5b,LOC108411478,LOC107670133,LOC107737424,LOC107731813,LOC107669866 other downstream 2004412 22708912 ~ 22758213 (+)

Expression


Co-expression Network