G5012


Basic Information

Item Value
gene id G5012
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035897.1
NCBI id CM008300.1
chromosome length 26953843
location 20882811 ~ 20883093 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU6724
ctacatgaagtttggaggtgtgtagtagtgatgaactctgaagctacatgaagtttggaggtgtgtagtagtgatgaactctgaagctacatgaagtttggaggtgtgtagtagtgatgaactctgaagctacatgaagtttggaggtgtgtagtagtgatgaactctgaagctacatgaagtttggaggtgtgtagtgattctgtaGTGACTCtgctgcagaaagttggtgaactatgtgca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU6724 True 243 lncRNA 0.36 2 20882811 20883093

Neighbor

gene id symbol gene type direction distance location
LOC103033175 NA coding upstream 141818 20732285 ~ 20740993 (+)
fam131a fam131a,LOC102799247 coding upstream 158237 20700702 ~ 20724574 (+)
LOC111192490 LOC108277610 coding upstream 193454 20671727 ~ 20689357 (+)
eif4g1 LOC108280304,LOC103370583 coding upstream 244863 20585146 ~ 20637948 (+)
LOC111192969 NA coding upstream 307384 20571402 ~ 20575427 (+)
LOC103030875 LOC108413394,LOC108278199 coding downstream 125028 21008121 ~ 21086736 (+)
LOC103042479 ecel1 coding downstream 306648 21189741 ~ 21245822 (+)
LOC103042160 LOC108412514 coding downstream 365760 21248853 ~ 21261198 (+)
clpb clpb,LOC107568463,LOC108261447,LOC108276567 coding downstream 941834 21824927 ~ 21890977 (+)
phox2a phox2a,LOC107738288,LOC107679437 coding downstream 1025180 21908273 ~ 21913768 (+)
G5003 NA non-coding upstream 119840 20757175 ~ 20762971 (+)
G4994 NA non-coding upstream 178311 20703760 ~ 20704500 (+)
G4951 NA non-coding upstream 396646 20485825 ~ 20486165 (+)
G4949 NA non-coding upstream 428318 20452126 ~ 20454493 (+)
G4940 NA non-coding upstream 497556 20384764 ~ 20385255 (+)
G5028 NA non-coding downstream 99150 20982243 ~ 20982748 (+)
G5036 NA non-coding downstream 204881 21087974 ~ 21160121 (+)
LOC103030556 NA non-coding downstream 378642 21261735 ~ 21269163 (+)
G5069 NA non-coding downstream 771944 21655037 ~ 21658746 (+)
G5067 arap1,LOC107729594,LOC107557643,LOC107701599 non-coding downstream 779397 21662490 ~ 21669652 (+)
LOC103037169 NA other upstream 299937 20558523 ~ 20582874 (+)
LOC107197594 NA other upstream 331176 20549191 ~ 20551635 (+)
G4775 LOC108411134 other upstream 1717180 19160731 ~ 19165631 (+)
G4612 NA other upstream 2122953 18759375 ~ 18759858 (+)
G4550 sik3 other upstream 2809148 18071964 ~ 18073663 (+)
G5026 NA other downstream 100614 20983707 ~ 20999200 (+)
LOC103022859 fgf12,fgf12b,fgf12a,LOC108411839,LOC108278337,LOC107689585,LOC108436038 other downstream 1173429 22056522 ~ 22154926 (+)
LOC103043812 gria4a,gria4,LOC107725765,LOC107670112,LOC107689577,LOC107566895,LOC107560842,LOC107756206,LOC107756230 other downstream 1524463 22407556 ~ 22524746 (+)
LOC103041654 chordc1,LOC108412466 other downstream 1759517 22642610 ~ 22673984 (+)
LOC103045948 grm5b,LOC108411478,LOC107670133,LOC107737424,LOC107731813,LOC107669866 other downstream 1825819 22708912 ~ 22758213 (+)

Expression


Co-expression Network