G5692


Basic Information

Item Value
gene id G5692
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035897.1
NCBI id CM008300.1
chromosome length 26953843
location 22906940 ~ 22915027 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU7693
CTTCAGAATCTGATTTGATCTAATCTAAAGTCCTCAGTTTAAGTGTTGATCTTACTGTAGCTCGTATGTGGCTCTTGGCGTCCCTCAGTTCCTGTCGGAGGCCCTCAGTGAGAGCGGTCACAGCGTACTTGGTGGAACTGTAGAAGTGTACATCAGCACTTTGCACCACCCGGTGTCCACTCATGCTAACACACACAGGAGACAACCTTCATCTTCAAGATCTGAGCAGATAGATAAATCTACTGATTTGGAACCAGGAGTATAAATAGAGGAGTTAAGATTTAACTGGAAGGGTCCAGGAGAAAATCTCCACAATCCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU7693 True 320 lncRNA 0.46 2 22906940 22915027

Neighbor

gene id symbol gene type direction distance location
LOC103021402 ywhag2,LOC103021402,LOC101160255,LOC107582613,LOC107694031,LOC100700540 coding downstream 52345 22842699 ~ 22854595 (-)
LOC111192983 NA coding downstream 90039 22813455 ~ 22816901 (-)
LOC103040843 tyr coding downstream 207690 22692855 ~ 22699250 (-)
folh1b folh1b,LOC107737433,LOC107670141,LOC107560856,LOC108412465,LOC107558820 coding downstream 240438 22651657 ~ 22666502 (-)
trnag-ucc_3 NA coding downstream 320732 22586137 ~ 22586208 (-)
LOC103023370 NA coding upstream 15288 22930315 ~ 22934263 (-)
LOC103022556 rab34a,LOC103022556,LOC108443499,LOC107758713,LOC107672399,LOC107657101 coding upstream 32567 22947594 ~ 22954020 (-)
LOC103023685 LOC108443500 coding upstream 40881 22955908 ~ 22964905 (-)
synrg synrg coding upstream 293734 23208761 ~ 23271997 (-)
hnf1b hnf1b coding upstream 371749 23286776 ~ 23301544 (-)
G5687 NA non-coding downstream 14030 22886990 ~ 22892910 (-)
G5682 NA non-coding downstream 35851 22869893 ~ 22871089 (-)
G5658 rab38,LOC103046565,LOC102778643 non-coding downstream 134873 22771779 ~ 22772067 (-)
G5568 NA non-coding downstream 257031 22648369 ~ 22649909 (-)
G5570 NA non-coding downstream 265105 22638058 ~ 22641835 (-)
G5705 NA non-coding upstream 39328 22954355 ~ 22996675 (-)
G5723 NA non-coding upstream 77917 22992944 ~ 22998372 (-)
G5947 NA non-coding upstream 662427 23577454 ~ 23582204 (-)
G5948 NA non-coding upstream 667335 23582362 ~ 23583884 (-)
G5949 NA non-coding upstream 708464 23623491 ~ 23671222 (-)
G5667 c2cd3 other downstream 108650 22796345 ~ 22798290 (-)
G5565 NA other downstream 278758 22607769 ~ 22628182 (-)
G5396 NA other downstream 706632 22131234 ~ 22200308 (-)
G5407 NA other downstream 748755 22155785 ~ 22158185 (-)
LOC111192507 NA other downstream 945475 21946786 ~ 21961465 (-)
LOC103028862 dynll2a,LOC107554284,LOC103397138 other upstream 420039 23335066 ~ 23339735 (-)
srsf1 srsf1a,srsf1b,LOC103029385,LOC108415197,LOC107587230,LOC107704814,LOC108278759,LOC108278234 other upstream 429469 23344496 ~ 23351222 (-)
LOC103033507 fam222bb,LOC107661104 other upstream 633697 23548724 ~ 23560500 (-)
LOC103035104 LOC103035104,LOC108443709,LOC108277991 other upstream 929228 23844255 ~ 23856637 (-)
hip1 hip1,LOC107659933 other upstream 1001025 23916052 ~ 23978227 (-)

Expression


Co-expression Network