G5723


Basic Information

Item Value
gene id G5723
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035897.1
NCBI id CM008300.1
chromosome length 26953843
location 22992944 ~ 22998372 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU7734
AAAATTTGACTGTTACTGTACCTTCATCTCAATGCTGTATATTAAGGCACAATATATAGACATTTATCGCAACTTATCAAGACCTGAACGTTAGTTGCCCTGGTGCAATAAACgcttttaatgatttgatttcTCCACTGGCAAGTGGGTAACTATATTTTGGCACTTAATTCCCAAAAGGCAGCACATGAACCAGGCAGCATAAACCACAGAGTGCCACTTCAGACACTACTGCACCTTTCATTCACTGTTATAATGATAGGAATTTCCTCAGATGTCCACTTTTTGGGATAGATCTTTAACATCATCCAAGATGTTTAAAGGATGTTGTGATTAAATGCTTCCTGTCCTCTTGCAGGCATCAATATCTGGAGACTCGAGATTTGGATCACTTTGGAATGGGCTCTTCAAAAAAaacctgTTCCTATAGCCAGAGTGAAGGCATCTCCGCAGGCAGCTGTGGTGACACCCTGCAGCCCTGGCACTGGATAAGGCACTCTGCTGCTGCGGCGAGAACTGCAGCCAAGCTGCCCGTGCTGGTTACTGCCGAAGGTGAAACACTGACCTTTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU7734 True 571 lncRNA 0.42 2 22992944 22998372

Neighbor

gene id symbol gene type direction distance location
LOC103023685 LOC108443500 coding downstream 28039 22955908 ~ 22964905 (-)
LOC103022556 rab34a,LOC103022556,LOC108443499,LOC107758713,LOC107672399,LOC107657101 coding downstream 38924 22947594 ~ 22954020 (-)
LOC103023370 NA coding downstream 58681 22930315 ~ 22934263 (-)
LOC103021402 ywhag2,LOC103021402,LOC101160255,LOC107582613,LOC107694031,LOC100700540 coding downstream 138349 22842699 ~ 22854595 (-)
LOC111192983 NA coding downstream 176043 22813455 ~ 22816901 (-)
synrg synrg coding upstream 210389 23208761 ~ 23271997 (-)
hnf1b hnf1b coding upstream 288404 23286776 ~ 23301544 (-)
LOC103030129 aldoca,LOC108415199,LOC108277446,LOC107727913,LOC107661107,LOC107714247 coding upstream 355534 23353906 ~ 23361001 (-)
LOC103030447 LOC108411681 coding upstream 367105 23365477 ~ 23376453 (-)
kiaa0100 kiaa0100,LOC107727920 coding upstream 379699 23378071 ~ 23409065 (-)
G5691 NA non-coding downstream 72898 22904721 ~ 22920046 (-)
G5692 NA non-coding downstream 77917 22906940 ~ 22915027 (-)
G5690 NA non-coding downstream 81562 22896336 ~ 22911382 (-)
G5694 NA non-coding downstream 83213 22908555 ~ 22909731 (-)
G5687 NA non-coding downstream 100034 22886990 ~ 22892910 (-)
G5947 NA non-coding upstream 579082 23577454 ~ 23582204 (-)
G5948 NA non-coding upstream 583990 23582362 ~ 23583884 (-)
G5949 NA non-coding upstream 625119 23623491 ~ 23671222 (-)
G5970 NA non-coding upstream 843452 23841824 ~ 23875442 (-)
G5975 NA non-coding upstream 889066 23887438 ~ 23888877 (-)
G5667 c2cd3 other downstream 194654 22796345 ~ 22798290 (-)
G5565 NA other downstream 364762 22607769 ~ 22628182 (-)
G5396 NA other downstream 792636 22131234 ~ 22200308 (-)
G5407 NA other downstream 834759 22155785 ~ 22158185 (-)
LOC111192507 NA other downstream 1031479 21946786 ~ 21961465 (-)
LOC103028862 dynll2a,LOC107554284,LOC103397138 other upstream 336694 23335066 ~ 23339735 (-)
srsf1 srsf1a,srsf1b,LOC103029385,LOC108415197,LOC107587230,LOC107704814,LOC108278759,LOC108278234 other upstream 346124 23344496 ~ 23351222 (-)
LOC103033507 fam222bb,LOC107661104 other upstream 550352 23548724 ~ 23560500 (-)
LOC103035104 LOC103035104,LOC108443709,LOC108277991 other upstream 845883 23844255 ~ 23856637 (-)
hip1 hip1,LOC107659933 other upstream 917680 23916052 ~ 23978227 (-)

Expression


Co-expression Network