G6189


Basic Information

Item Value
gene id G6189
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035897.1
NCBI id CM008300.1
chromosome length 26953843
location 24424862 ~ 24429277 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU8432
ctaggcagttgctaacgtattccaggtggttgctaggcagttgctaagtggttgctaggcagttgctaacgttttccaagtggttgctaggcagttgctaagtggttgctaggcagttgctaacgttttccaggtggttgctaagtggttgctaggcagttgctaacgttttccaggtggttgctaggcagttgctaacgttttccaggtggttgctaggcagttgctaagtggttgctag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU8432 True 241 lncRNA 0.49 2 24424862 24429277

Neighbor

gene id symbol gene type direction distance location
LOC103045605 LOC103045605,LOC108425892 coding upstream 65560 24347555 ~ 24359302 (+)
LOC103046413 LOC103045605,LOC108425892 coding upstream 83901 24329020 ~ 24340961 (+)
LOC103022207 NA coding upstream 98324 24311042 ~ 24326538 (+)
LOC111192659 NA coding upstream 128512 24291928 ~ 24296350 (+)
LOC103047234 NA coding upstream 137736 24283322 ~ 24287126 (+)
wdr81 wdr81 coding downstream 2045 24431322 ~ 24452907 (+)
serpinf2 serpinf2 coding downstream 26409 24455686 ~ 24464470 (+)
rpa1 rpa1,LOC107562955,LOC107548543 coding downstream 37176 24466453 ~ 24507625 (+)
dph1 dph1,LOC107664954,LOC107685060,LOC107744807,LOC107585615 coding downstream 454277 24883554 ~ 25030569 (+)
LOC103025376 taok1a,LOC108425880,LOC108277908,LOC107585593,LOC107744793,LOC107685056,LOC107664926,LOC107592626 coding downstream 898052 25327329 ~ 25360956 (+)
G6168 NA non-coding upstream 30432 24385103 ~ 24394430 (+)
G6167 NA non-coding upstream 39936 24384435 ~ 24384926 (+)
LOC111192656 NA non-coding upstream 145394 24271550 ~ 24279468 (+)
LOC111192653 NA non-coding upstream 170950 24253155 ~ 24253912 (+)
G6051 NA non-coding upstream 299500 24114947 ~ 24125362 (+)
G6190 NA non-coding downstream 6319 24435596 ~ 24456708 (+)
G6193 NA non-coding downstream 23641 24452918 ~ 24454335 (+)
G6213 NA non-coding downstream 312141 24741418 ~ 24795989 (+)
G6219 NA non-coding downstream 525291 24954568 ~ 25032082 (+)
G6221 NA non-coding downstream 612095 25041372 ~ 25042911 (+)
LOC103022942 LOC106931471,LOC106940241,LOC101067200,LOC107659943,LOC106603438 other upstream 517388 23876999 ~ 23907474 (+)
LOC103035426 NA other upstream 577495 23839993 ~ 23847367 (+)
G5871 NA other upstream 591032 23832236 ~ 23833830 (+)
G5797 srsf1a,srsf1b,LOC103029385,LOC108415197,LOC107587230,LOC107704814,LOC108278759,LOC108278234,LOC107661749 other upstream 1073556 23312512 ~ 23351306 (+)
LOC103024639 NA other upstream 1268496 23081391 ~ 23156366 (+)
LOC103027586 LOC108425877 other downstream 982917 25412194 ~ 25428351 (+)
G6576 ywhae,ywhae1,LOC107690422,LOC107578326 other downstream 1610879 26040156 ~ 26046246 (+)
LOC103042574 NA other downstream 2490014 26919291 ~ 26931495 (+)

Expression


Co-expression Network