G6363


Basic Information

Item Value
gene id G6363
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035897.1
NCBI id CM008300.1
chromosome length 26953843
location 25213417 ~ 25213701 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU8662
aactgtgatgagatttttctgatagctgcttaaaaatactcgtctccgaaacaaaacacacagattaaaccttttaaaataaaaaaaatacagcttgtgactcagtttaactagaaaatgtggagaggaccgaaattaactgaactgatcaggcgttgagtgatcaaaagaaagaagtattaattaaaaatgattaattgtgtaggccccttaggactaatttttactgatggaatatatctggtccatgtccttttagtaaaagctcataatactatttttagg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU8662 True 285 lncRNA 0.32 1 25213417 25213701

Neighbor

gene id symbol gene type direction distance location
dph1 dph1,LOC107664954,LOC107685060,LOC107744807,LOC107585615 coding upstream 182848 24883554 ~ 25030569 (+)
rpa1 rpa1,LOC107562955,LOC107548543 coding upstream 705792 24466453 ~ 24507625 (+)
serpinf2 serpinf2 coding upstream 748947 24455686 ~ 24464470 (+)
wdr81 wdr81 coding upstream 760510 24431322 ~ 24452907 (+)
LOC103045605 LOC103045605,LOC108425892 coding upstream 854115 24347555 ~ 24359302 (+)
LOC103025376 taok1a,LOC108425880,LOC108277908,LOC107585593,LOC107744793,LOC107685056,LOC107664926,LOC107592626 coding downstream 113628 25327329 ~ 25360956 (+)
tp53i13 NA coding downstream 148431 25362132 ~ 25372748 (+)
LOC103026515 LOC108425801 coding downstream 164418 25378119 ~ 25386942 (+)
LOC103027284 NA coding downstream 177309 25391010 ~ 25397534 (+)
LOC103028751 tlcd2,LOC103028751,LOC107585588,LOC107664963,LOC107743747,LOC107592621,LOC107685052,LOC107744789 coding downstream 268404 25482105 ~ 25524455 (+)
G6221 NA non-coding upstream 170506 25041372 ~ 25042911 (+)
G6219 NA non-coding upstream 181335 24954568 ~ 25032082 (+)
G6213 NA non-coding upstream 417428 24741418 ~ 24795989 (+)
G6190 NA non-coding upstream 756709 24435596 ~ 24456708 (+)
G6193 NA non-coding upstream 759082 24452918 ~ 24454335 (+)
LOC111192677 NA non-coding downstream 49442 25263143 ~ 25280617 (+)
G6374 tsr1 non-coding downstream 90482 25304183 ~ 25304685 (+)
G6376 tsr1 non-coding downstream 95993 25309694 ~ 25318510 (+)
G6377 tsr1,LOC107685058,LOC107592627,LOC107743656 non-coding downstream 105807 25319508 ~ 25320728 (+)
G6441 LOC108425873 non-coding downstream 256976 25470677 ~ 25474186 (+)
LOC103022942 LOC106931471,LOC106940241,LOC101067200,LOC107659943,LOC106603438 other upstream 1305943 23876999 ~ 23907474 (+)
LOC103035426 NA other upstream 1366050 23839993 ~ 23847367 (+)
G5871 NA other upstream 1379587 23832236 ~ 23833830 (+)
G5797 srsf1a,srsf1b,LOC103029385,LOC108415197,LOC107587230,LOC107704814,LOC108278759,LOC108278234,LOC107661749 other upstream 1862111 23312512 ~ 23351306 (+)
LOC103024639 NA other upstream 2057051 23081391 ~ 23156366 (+)
LOC103027586 LOC108425877 other downstream 198493 25412194 ~ 25428351 (+)
G6576 ywhae,ywhae1,LOC107690422,LOC107578326 other downstream 826455 26040156 ~ 26046246 (+)
LOC103042574 NA other downstream 1705590 26919291 ~ 26931495 (+)

Expression


Co-expression Network