G6576 (ywhae,ywhae1,LOC107690422,LOC107578326)


Basic Information

Item Value
gene id G6576
gene name ywhae,ywhae1,LOC107690422,LOC107578326
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035897.1
NCBI id CM008300.1
chromosome length 26953843
location 26040156 ~ 26046246 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU8949
CAGAAATTACAATTAATGTTGGTTTCAGAAGTggttttttatttcaattaaaaggactaataaaaagaatattaaaaatgaaacaaagggagaaaaaaatggaGGCATCAAGCTTTTGAGTGTCACTCTTGAGGTTGGGCTTGGTGGCTCCCTTTGTGAGTAGGTTTGGGAAGGAGGATTGGGGTGGGGTGGAGTTTCGCATTGGCTGTGATGTCTCACGGGTTCTCATCCTCCACATCTTGCAGCGCCTCTTTATTCTGTTCCTCTCATCTCCCTGCATATCTGAAGTCCATAGTGTCAGATTATCACGTAACAACTGCATGATGAGTGTGGAGTCCTTGTAGCTTTCTTCACTCAATGTGTCCAGCTCAGCAATAGCATCATCAAACGCTGCCTTTGCCAACctgCATGCACGGTCAGGAGAATTGAGGATTTCATAGTAGAATACAGAGAAGTTAAGAGCAAGACCCAAGCGAATGGGATGTGTAGGTTGAAGGTCTGTCATTGCAATATCACTAGCAGCTTTGTAAGCGACCAAACTATTTTCTGCAGCCTCCTTCCTGTCGTTGCCTGTAGCAAACTCTGCGAGATACCTGTGGTAATCACCCTTCTTTTGTAGTAGAAGACCTTGGACTCTCCTGAATTAGCAGCTGGAATTAGGTGCTTATCCAAAACATCAAGGATGTCATTGCAGATTGATTTCAGCTCAGTCTCAACCGTTTGCCTGTACTCCCGGATCATTTTCAGTTTGTCTTCGCCACccttattttcttctttctgctcAATACTGCTAATTATCCTCCAGGATGCTCTTCGTGCACCAATAACATTCTTGTACGCCACTGATAGCAGATTTCTTTCTTCAACTGTGAGTTCAACGTCCATGCCAGCCACCTTCTTCATGGAGTCAACCATCTCGTATCTCTCCGCCTGCTCGGCGAGCTTGGCTTGGTATACTAAGTCCTCCCGGTTAGCCATGTTGGAAAGTGTGACACGAGCCTATTCAGTGACGGATTCTCGGTAAAGGAGTGTGTGTAAAAGCGGCAGGCCCTCGTAGGAGAAGCAGCTGCAGCCTGAACCGTGTTGAAGCCCCGCTGTCCGCCGGCGCCACTGGGGCAAAAATGGCGAGA
>TU8950
CAGAAATTACAATTAATGTTGGTTTCAGAAGTggttttttatttcaattaaaaggactaataaaaagaatattaaaaatgaaacaaagggagaaaaaaatggaGGCATCAAGCTTTTGAGTGTCACTCTTGAGGTTGGGCTTGGTGGCTCCCTTTGTGAGTAGGTTTGGGAAGGAGGATTGGGGTGGGGTGGAGTTTCGCATTGGCTGTGATGTCTCACGGGTTCTCATCCTCCACATCTTGCAGCGCCTCTTTATTCTGTTCCTCTCATCTCCCTGCATATCTGAAGTCCATAGTGTCAGATTATCACGTAACAACTGCATGATGAGTGTGGAGTCCTTGTAGCTTTCTTCACTCAATGTGTCCAGCTCAGCAATAGCATCATCAAACGCTGCCTTTGCCacctgCATGCACGGTCAGGAGAATTGAGGATTTCATAGTAGAATACAGAGAAGTTAAGAGCAAGACCCAAGCGAATGGGATGTGTAGGTTGAAGGTCTGTCATTGCAATATCACTAGCAGCTTTGTAAGCGACCAAACTATTTTCTGCAGCCTCCTTCCTGTCGTTGCCTGTAGCAAACTCTGCGAGATACCTGTGGTAATCACCCTTCTTTTGTAGTAGAAGACCTTGGACTCTCCTGAATTAGCAGCTGGAATTAGGTGCTTATCCAAAACATCAAGGATGTCATTGCAGATTGATTTCAGCTCAGTCTCAACCGTTTGCCTGTACTCCCGGATCATTTTCAGTTTGTCTTCGCCACccttattttcttctttctgctcAATACTGCTAATTATCCTCCAGGATGCTCTTCGTGCACCAATAACATTCTTGTACGCCACTGATAGCAGATTTCTTTCTTCAACTGTGAGTTCAACGTCCATGCCAGCCACCTTCTTCATGGAGTCAACCATCTCGTATCTCTCCGCCTGCTCGGCGAGCTTGGCTTGGTATACTAAGTCCTCCCGGTTAGCCATGTTGGAAAGTGTGACACGAGCCTATTCAGTGACGGATTCTCGGTAAAGGAGTGTGTGTAAAAGCGGCAGGCCCTCGTAGGAGAAGCAGCTGCAGCCTGAACCGTGTTGAAGCCCCGCTGTCCGCCGGCGCCACTGGGGCAAAAATGGCGAGA
>TU8951
ataaaactatatatcaaaataaacacaaacctgCATGCACGGTCAGGAGAATTGAGGATTTCATAGTAGAATACAGAGAAGTTAAGAGCAAGACCCAAGCGAATGGGATGTGTAGGTTGAAGGTCTGTCATTGCAATATCACTAGCAGCTTTGTAAGCGACCAAACTATTTTCTGCAGCCTCCTTCCTGTCGTTGCCTGTAGCAAACTCTGCGAGATACCTGTGGTAATCACCCTTCTTTTGTAGTAGAAGACCTTGGACTCTCCTGAATTAGCAGCTGGAATTAGGTGCTTATCCAAAACATCAAGGATGTCATTGCAGATTGATTTCAGCTCAGTCTCAACCGTTTGCCTGTACTCCCGGATCATTTTCAGTTTGTCTTCGCCACccttattttcttctttctgctcAATACTGCTAATTATCCTCCAGGATGCTCTTCGTGCACCAATAACATTCTTGTACGCCACTGATAGCAGATTTCTTTCTTCAACTGTGAGTTCAACGTCCATGCCAGCCACCTTCTTCATGGAGTCAACCATCTCGTATCTCTCCGCCTGCTCGGCGAGCTTGGCTTGGTATACTAAGTCCTCCCGGTTAGCCATGTTGGAAAGTGTGACACGAGCCTATTCAGTGACGGATTCTCGGTAAAGGAGTGTGTGTAAAAGCGGCAGGCCCTCGTAGGAGAAGCAGCTGCAGCCTGAACCGTGTTGAAGCCCCGCTGTCCGCCGGCGCCACTGGGGCAAAAATGGCGAGA

Function

symbol description
ywhae1 Predicted to enable monooxygenase activity. Is expressed in several structures, including immature eye; nervous system; otic vesicle; post-vent region; and tail bud. Orthologous to human YWHAE (tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon).
ywhae Enables several functions, including enzyme binding activity; ion channel regulator activity; and protein heterodimerization activity. Involved in several processes, including negative regulation of peptidyl-serine dephosphorylation; positive regulation of protein export from nucleus; and regulation of ion transmembrane transport. Located in cytosol and nucleus. Colocalizes with plasma membrane.

NR:

description
PREDICTED: glucagon receptor-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU8949 True 1130 TUCP 0.46 6 26040156 26046246
TU8950 False 1129 TUCP 0.32 6 26040156 26046246
TU8951 False 756 TUCP 0.56 4 26043059 26046246

Neighbor

gene id symbol gene type direction distance location
tusc5 tusc5 coding upstream 90663 25930463 ~ 25949493 (+)
aipl1 aipl1,LOC102791624 coding upstream 110903 25916237 ~ 25929253 (+)
LOC103033293 NA coding upstream 213407 25815278 ~ 25826749 (+)
exo5 NA coding upstream 265785 25764488 ~ 25774371 (+)
rflnb LOC108425865,LOC107744779,LOC107664902 coding upstream 277673 25758935 ~ 25762483 (+)
tmem199 tmem199 coding downstream 70860 26117106 ~ 26121289 (+)
gemin4 NA coding downstream 152673 26198919 ~ 26203484 (+)
appbp2 appbp2 coding downstream 717499 26763745 ~ 26777988 (+)
usp32 usp32,LOC108425843 coding downstream 743363 26789609 ~ 26867159 (+)
LOC103040422 LOC108277907,LOC108425840,LOC107734097,LOC107690476,LOC107690468 coding downstream 820989 26867235 ~ 26883997 (+)
G6574 NA non-coding upstream 37178 25999217 ~ 26002978 (+)
G6567 gosr1,LOC107743674,LOC107690419 non-coding upstream 42464 25960481 ~ 25997692 (+)
LOC111192696 NA non-coding upstream 151339 25864386 ~ 25888817 (+)
G6516 NA non-coding upstream 240415 25798918 ~ 25799741 (+)
G6514 NA non-coding upstream 242970 25796622 ~ 25797186 (+)
G6588 NA non-coding downstream 2432 26048678 ~ 26051179 (+)
G6625 NA non-coding downstream 75113 26121359 ~ 26173262 (+)
G6635 LOC108425851 non-coding downstream 96963 26143209 ~ 26190247 (+)
G6644 NA non-coding downstream 158554 26204800 ~ 26212818 (+)
G6648 NA non-coding downstream 173716 26219962 ~ 26236163 (+)
LOC103027586 LOC108425877 other upstream 611805 25412194 ~ 25428351 (+)
LOC103022942 LOC106931471,LOC106940241,LOC101067200,LOC107659943,LOC106603438 other upstream 2132682 23876999 ~ 23907474 (+)
LOC103035426 NA other upstream 2192789 23839993 ~ 23847367 (+)
G5871 NA other upstream 2206326 23832236 ~ 23833830 (+)
G5797 srsf1a,srsf1b,LOC103029385,LOC108415197,LOC107587230,LOC107704814,LOC108278759,LOC108278234,LOC107661749 other upstream 2688850 23312512 ~ 23351306 (+)
LOC103042574 NA other downstream 873045 26919291 ~ 26931495 (+)

Expression


Co-expression Network