LOC103032687 (gmfg,LOC103032687,LOC108277844,LOC107757325,LOC107679065,LOC107090391)


Basic Information

Item Value
gene id LOC103032687
gene name gmfg,LOC103032687,LOC108277844,LOC107757325,LOC107679065,LOC107090391
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035897.1
NCBI id CM008300.1
chromosome length 26953843
location 18250923 ~ 18256343 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007233947.3
CAATCTGGgctgtcagcagcagcagcatcctgtCACAAGCTCTCTGTGAAAGAAGGAACTAGAGCAGTAGAAGTACTCGCCGGAACGCAGTGTGCAGAATGTCAAGCTCCCTGGTCGTGTGTGAGGTGGACCCAAGCCTTCAAGAGAAGCTGAAGAAGTTTCGCTTTCGGAAAGAGACCAACAATGCTGCCATACTGATGAAAATTGACATGGAGAAACAACTGGTCATCCTAGAAGAGGAGTATGAGgACATCTCACTGGATGACCTGAGGGAGGAACTTCCTGAACGGCAGCCCAGATACATAGTGTACAGCTATAAGCTGACGCACGGTGATGGTAGAGTGTCCTATCCGCTGtgtttcatcttctccagccCTGTGGGCTGCAAACCTGAGCAGCAGATGATGTACGCCGGCAGCAAGAACAGACTGGTCCAGTCAGCAGAACTCACCAAGGTGTTCGAGATCCGAAATGCAGATGACCTGTCTGAGGAGTGGCTGAAGGAaaaactttctttctttcgctGATTTATACTGGACTGACCACAGACTTCTGAAAGAGATCACAGTTATTAgttttaagctttaaaaaaaataatttaaatgatgatatattgttaaatacacttaaagcaaTGCCTTCCAGCATCTTGTCAGATTCAGACGTTTAActttcctttatttaaaaaggttTCACCTCATTTTGGACTTCCGACTGAATTTTAATGCGTGAAAAATTACCCTTATTTGTTTCTCACAGATGTTTTATAGGAGCCTATTATCAGCACTAAGCATGAAATACAGATTTAGATATAAAGACAGCAatgttacaaaataataaaacaaaaatcttaTTTCTTATAGTGACCTAGCTTTATTGCCAAATACGTTTTAAATCTACATTATGCATAAATGGCAGCAGCTTTCAATGCTCAATAACTCAGGATgtattagattattatataactgtttaCTAGTCTGTGAATAGTGTTGTCCTTTTTTTGTGTAATGACCATTTTCTATTGTGTCTATATTGATTAAAATCTATATTGATTGACCTGA

Function

symbol description
gmfg Predicted to enable Arp2/3 complex binding activity; actin binding activity; and growth factor activity. Acts upstream of or within sprouting angiogenesis. Is expressed in blood vessel and head. Orthologous to human GMFG (glia maturation factor gamma).

NR:

description
glia maturation factor gamma

GO:

id name namespace
GO:0005622 intracellular anatomical structure cellular_component
GO:0003779 actin binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007233947.3 True 1061 mRNA 0.40 7 18250923 18256343

Neighbor

gene id symbol gene type direction distance location
sidt2 sidt2 coding upstream 84246 18138024 ~ 18166677 (+)
LOC103030597 LOC108412477 coding upstream 118970 18124694 ~ 18131953 (+)
LOC111192370 NA coding upstream 228534 18017759 ~ 18022389 (+)
lsamp lsamp coding upstream 377107 17454350 ~ 17873816 (+)
LOC111192859 sae1,LOC107718284 coding upstream 1559164 16689234 ~ 16691759 (+)
LOC103033229 psa6,LOC103033229,LOC106612618,LOC105026880,LOC106580837 coding downstream 18482 18274825 ~ 18281029 (+)
LOC103036794 map4k1,LOC108443018,LOC107757316,LOC107679433,LOC101883459,LOC104956018 coding downstream 75996 18332339 ~ 18386319 (+)
LOC103034176 LOC108443019,LOC107663551,LOC107572208,LOC107557657,LOC107679443,LOC108277854 coding downstream 133085 18389428 ~ 18400138 (+)
trnaw-cca NA coding downstream 144711 18401054 ~ 18401125 (+)
trnag-ucc NA coding downstream 147362 18403705 ~ 18403776 (+)
G4563 NA non-coding upstream 72840 18177608 ~ 18178083 (+)
G4549 NA non-coding upstream 185162 18063434 ~ 18065761 (+)
G4531 NA non-coding upstream 212179 18034511 ~ 18038744 (+)
G4460 NA non-coding upstream 241576 17929724 ~ 18009347 (+)
G4467 NA non-coding upstream 265734 17958512 ~ 17985189 (+)
G4582 paf1 non-coding downstream 2228 18258571 ~ 18306252 (+)
G4589 crx,LOC108443020,LOC107395012,LOC106935423,LOC106914190,LOC103155943,LOC107094494 non-coding downstream 42173 18298516 ~ 18302148 (+)
G4587 NA non-coding downstream 49015 18305358 ~ 18306149 (+)
G4591 NA non-coding downstream 58211 18314554 ~ 18328007 (+)
G4608 NA non-coding downstream 460618 18716961 ~ 18717640 (+)
G4550 sik3 other upstream 177260 18071964 ~ 18073663 (+)
LOC103039709 NA other upstream 238820 18010178 ~ 18012103 (+)
G4219 ckm,ckmb,ckma,LOC107690449,LOC107683830,LOC107601735,LOC107743697,LOC107718278 other upstream 1627854 16619046 ~ 16623069 (+)
G4221 NA other upstream 1705069 16542942 ~ 16545854 (+)
LOC103040601 NA other upstream 2424820 15781638 ~ 15826103 (+)
G4612 NA other downstream 503032 18759375 ~ 18759858 (+)
G4775 LOC108411134 other downstream 904388 19160731 ~ 19165631 (+)
LOC107197594 NA other downstream 2292848 20549191 ~ 20551635 (+)
LOC103037169 NA other downstream 2302180 20558523 ~ 20582874 (+)
G5026 NA other downstream 2727364 20983707 ~ 20999200 (+)

Expression


Co-expression Network