tp53i13


Basic Information

Item Value
gene id tp53i13
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035897.1
NCBI id CM008300.1
chromosome length 26953843
location 25362132 ~ 25372748 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007245901.3
GGCTTTATTTATCAATGACGTCACGGCTGGACCTGTGGATCGGACATGTTGTAGGGTGAAAGTTCCTGATAGCTCTTCTGCGGCGGGTTTACGGGTGTTTTGGTTGTAGTTTCTGTACTAGTTTAAGGTGAGTGTGTGATTTAGGCTGGCGGCTGTAGAGCTGAGGCCTGGGAGTGGAGCTGTACAGTCCTGCTGAACCCCGGGCAGGTATCCGCAGTTACCCAAGCAGCAGCTGCAGGCCCCTCTCTCCCCCTCAGTGCTGGGTCTGCTGAACCCTCAGAGCTCCAGGTTTGAGCAGATTATGGATCTGCCTGATTCCCGGGGCTGTGTAAGAGTAGTTGTGAGAGCAgggcagcagtgtgtgagagggagGAAGCGCAGGCTGCAGGCAGGCCCGGCTGTACAGAACTTCAGTAGGAAGTTTAGATAGACAGCCTCTCCGGTGCCTGAGggtctccagcagcagcagtcctGGATGTGAGGCTGCAGTTATGAGGCTCAAGGCTGTGACTCTGTTTTGTGGATTTTCGTGGCTCTGGCTGATAAAACTCTGTCAGTCAGCACGGTGGAGTCAACACTGCGACAATGGAAAGgtAAAGCTGGAGACAGATCTACCTCAGTCTGATGAGCTCGCGTGTCCGGAGCCGTGGCCACAGTCACCTCAGAGGCTTGCTGATCTTTCCACCAAATACCCCGTACAGCCAGCTGAGCAGATCTGCATGAATATGACCATCAAATATAATCAAACCATCCCCAGCAGTGGGGCTCACAGGCCTGTAGGAGCTCTTAGTGGAGAGTACCTGTACTGCCCCCCTCAGCGCTGGCTTAACAACCTGAAGGATGGCGCCATAGTTCTCCTTTACCACCCTTGTGCCTCAGAGATTGGTCGCAGAGCTCTGGCAGCGATGGCCCACTCCTGCCTTCATCACTACATCCTCACAGCTCACCCCCAGCTCAGCCAGCACAGACCTTTTGCCCTGGTGTCCTGGGGTTATACTCTTGAGATGTCCCATGTGACCTCAGCAGGAGTGTGTGACTGGTTGCTCGCAGCTTTCTCCAACTTTAATCAAACCAAGGAAGGACAAAGGCCAAAGTACAGCCTGTATTTGACCAAGGCAGCACCTGTGGACAGAGTGCTGGGTACTACTGTAAAGTCTCTGAGAGCATGCTGTGTGGAGGCTTTGTCTGTATATGAGCAAAGTGCTGCAAGAACGAAATCGAGAAGGAGTCTGGACGCCCACCAATCCAACAAGAGTGATGAGGCAATGCTGTCCCAAAACAACCCTGCACAGAACAGCTCAGAGTCCAAAATACtgaactctacacacacacaatccctgAACATTACTGAGGATAAAGAGGTACCTCCTGAAACCCCTCATCCTGAGCAACACTCGTACTTCCTCCACACTGCCACGCCAGAAAAACCAGAAGAAAGGACAACAGCTACATACAGAATTACAATGAAAGCACTGTCACCAGACCACGTTAAAGGAGACGCAGCTACAAAATCCCTTATAAAGACCCCAGAGTCCGGTCTGTCGTCTCACAAAAAGACTAAACTGAAAGTTCATAAGCACCGCATTAAAACCGACACAGAGGAGCAGGGTGGTGAGAGGGGTGGCGGCTGTGGAGCGCCAGGTCAGTGCACAGCTCCAAACACAGCAGCTCCAAAGAAAAGTGGACCTCTGCAGAGCCACAGGATGCCCACAGCGCGAACTGATGAGGCGGTGTGGGCCGCTGCTGCTCTGGGCTTCCTCTTAGTGCTGCTCACGCTCTCTGTGCTCCACACGCGCCTGTACCGCAACTGGCGCACACCACCCAGCCTGTACTGGCGCGAGACCCAGCAGGACTATGAGAGCGTGGCAGATATTATTCGGAGGAGACTGAGGATGGTgggaaggaggaagaggagatcCAGTCAGAGCAGAAGACAAGAGTGCCCTCTTCTGCCTGACTCCAGCACTGACAATGATTCAGACTGAACCACACAGTGTATCAGAGTGTTTATGGAACTGACTGACCCAGTCCACTGTACTGGACAATCTGTGGGACTTTTCTTTATTCCACTATGTTTACCTGAGATCTGCCTTCACATGTTTATCAGCACTGCTGGTCCATATTCAACATATGCAAGCATGCAGGACCACACAGGATTTACATACACGTCTCTCACAAAGCGTCTTCAGTAGCATGCTCACCCACCAATATTCTGACTTGAATTCaagctttactttatttacgTGTTTAATGCTGAATCCTGACTGAAGAGCTGAACATTTTTGAATAACATGTTCATGGTACATTTAATGGTGCAAgagcctgatttttttttttttcttttttcagactTTTTGAAAAACTCTTATTCCATCTCCATCAAGAGACCAAGGCAAAATAAaagcacagtttttttattctgttagaAATGAattcatattcattttacttataCTCAAgtatataaaa

Function

NR:

description
PREDICTED: tumor protein p53-inducible protein 13-like isoform X1

GO:

id name namespace
GO:0048592 eye morphogenesis biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007245901.3 True 2469 mRNA 0.50 9 25362132 25372748

Neighbor

gene id symbol gene type direction distance location
LOC103025376 taok1a,LOC108425880,LOC108277908,LOC107585593,LOC107744793,LOC107685056,LOC107664926,LOC107592626 coding upstream 1176 25327329 ~ 25360956 (+)
dph1 dph1,LOC107664954,LOC107685060,LOC107744807,LOC107585615 coding upstream 331563 24883554 ~ 25030569 (+)
rpa1 rpa1,LOC107562955,LOC107548543 coding upstream 854507 24466453 ~ 24507625 (+)
serpinf2 serpinf2 coding upstream 897662 24455686 ~ 24464470 (+)
wdr81 wdr81 coding upstream 909225 24431322 ~ 24452907 (+)
LOC103026515 LOC108425801 coding downstream 5371 25378119 ~ 25386942 (+)
LOC103027284 NA coding downstream 18262 25391010 ~ 25397534 (+)
LOC103028751 tlcd2,LOC103028751,LOC107585588,LOC107664963,LOC107743747,LOC107592621,LOC107685052,LOC107744789 coding downstream 109357 25482105 ~ 25524455 (+)
ccdc92b LOC108425871 coding downstream 157401 25530149 ~ 25548395 (+)
cluh cluh,cluha,LOC107664929 coding downstream 178474 25551222 ~ 25583981 (+)
G6377 tsr1,LOC107685058,LOC107592627,LOC107743656 non-coding upstream 41404 25319508 ~ 25320728 (+)
G6376 tsr1 non-coding upstream 43622 25309694 ~ 25318510 (+)
G6374 tsr1 non-coding upstream 57447 25304183 ~ 25304685 (+)
LOC111192677 NA non-coding upstream 81515 25263143 ~ 25280617 (+)
G6363 NA non-coding upstream 148431 25213417 ~ 25213701 (+)
G6441 LOC108425873 non-coding downstream 97929 25470677 ~ 25474186 (+)
G6445 NA non-coding downstream 117466 25490214 ~ 25501185 (+)
G6446 NA non-coding downstream 130254 25503002 ~ 25503585 (+)
G6464 NA non-coding downstream 175990 25548738 ~ 25549685 (+)
G6514 NA non-coding downstream 423874 25796622 ~ 25797186 (+)
LOC103022942 LOC106931471,LOC106940241,LOC101067200,LOC107659943,LOC106603438 other upstream 1454658 23876999 ~ 23907474 (+)
LOC103035426 NA other upstream 1514765 23839993 ~ 23847367 (+)
G5871 NA other upstream 1528302 23832236 ~ 23833830 (+)
G5797 srsf1a,srsf1b,LOC103029385,LOC108415197,LOC107587230,LOC107704814,LOC108278759,LOC108278234,LOC107661749 other upstream 2010826 23312512 ~ 23351306 (+)
LOC103024639 NA other upstream 2205766 23081391 ~ 23156366 (+)
LOC103027586 LOC108425877 other downstream 39446 25412194 ~ 25428351 (+)
G6576 ywhae,ywhae1,LOC107690422,LOC107578326 other downstream 667408 26040156 ~ 26046246 (+)
LOC103042574 NA other downstream 1546543 26919291 ~ 26931495 (+)

Expression


Co-expression Network