LOC103033181 (LOC108411674,LOC108277977)


Basic Information

Item Value
gene id LOC103033181
gene name LOC108411674,LOC108277977
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035897.1
NCBI id CM008300.1
chromosome length 26953843
location 23531850 ~ 23544221 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007248646.3
CCGGATCGTATGCCACCAGCCCATCACTGCTACTGACACTCAGCACAGACTCACAGCACAGACATGGCTGTGGACCTCAGGGCTGTGCTGCTCTCTGCCTTCGACTATAAGACGGAGAAATATGTTATTGCTAAGAATAAGAAAGTGGGAATTCTGTACAGAGTGATTCAGCTCTCTCTGCTGGGATATATCATCGGctgggTGTTCCTGACGAAGAAAGGCTACCAGGAGACTGAGGAATCTATTCAGAGTTCAGTCATCACCAAAGTTAAAGGGGTTTTACTCACCAACTCCTCAGGAACTGGACCTCGACTCTGGGGGCCAGAGGACTACGTAATCCCACAGCAGGGAGAAGATGTGCTTTTTATAACAACCAACTTCATAGAAACGCCAAATCAGAAATTAGGCTATTGTGCTGAGAGTTTTAAGGTGCTAGACGGTCGATGCAGGAAGAATGAAGACTGTCCAGAGGGAGAGGCAGTCGTAGCTGGAAACGGAGTTCGGACTGGACGCTgcctgaagaaagacaggaacTCCACTGGAACGTGTGAAATATACGGCTGGTGCCCCATCGAGAAAAGCCAGCGGCTAATTGTGCCTTTATTAGGAAAAACTGAAAACTTTACCATATACATAAAGAACTTCATCAGATTCCCCAAGTTCGGCTTCTCAAAATCGAATGTCTTGGACACAGCCGGGGACTCGTATTTAAAGACGTGTTTATACGATGCGATTGCTCATCCATACTGCCCCATATTTCGTCTTGGAGATATCGTCCTCAGATCTGGACACGACTTTCAGGACATGGCTTTACTGGGTGGATCTATTGGAATCCTAATCGAGTGGCACTGTGATCTGGATAAAGGCTATTCACACTGCCACCCCCGATACACCTTCACACGACTGGACTTCAATTCTACAGCCAACTCCGTCTCATCAGGATACAACTTCAGATACGCCCACTACTTCAAAAACCCTGCAGGAGAGACTCACAGAACACTATTAAAGGTGTACGGGATTCGCTTTGACATCCAGGTTCATGGCAGAgcgGGAAAATTTAACATAATTCCCACAATTATAAACATAGGATCTGGTCTTGCCTTAATGGGAGCTgGGAGTTTCTTCTGTGATATGGTGCTTCTCTATATGATGAAGAAAAGTACCCTCTACAGGGAGAGGAAGTTCGAAAAAGCTAACAAGAACGGAAACAACAATAATTCAGAAGATTCTGAGAAAGAGCCTTCAGAGGCGGAGCAACTGACTGACCCAACACCTGACCAACACAGCGAGGCAACAACTCCGTGTTTATACCCTATAGAGCAGCATGAGAATCCAACTGACGGACAAATAAACCCATCCGATTGACAGACATCCCATCCCAAAGAGAATGCCCATCCCAAAGAGTGTATAAAGTTGCCTACTGTCTACTTGACctctgaattgaattgaattgaatccaGATTGGATTACTGTACGAAGTAGGTATCCATTCAATACTACACTTACTTGAAGTTGGGTGCAATAACCAAAAGCCTAAAAACAAAGCTGTGATTGACACTGAtgtttgtactatttttatttttattaggttGGTATGAATGAgatatatggcacaccctt

Function

NR:

description
PREDICTED: P2X purinoceptor 5-like

GO: NA

KEGG:

id description
K05219 P2RX5; P2X purinoceptor 5

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007248646.3 True 1620 mRNA 0.45 12 23531850 23544221

Neighbor

gene id symbol gene type direction distance location
mrm3 NA coding upstream 110359 23417139 ~ 23421491 (+)
dusp14 dusp14 coding upstream 329833 23191090 ~ 23202017 (+)
tada2a tada2a,LOC107661114,LOC107755391 coding upstream 354291 23158514 ~ 23177559 (+)
traf4 traf4,traf4a,LOC108443497,LOC107758738,LOC107727926 coding upstream 467328 23001851 ~ 23064522 (+)
nek8 nek8,LOC107672375,LOC107758702,LOC107592757,LOC107661116 coding upstream 533568 22975520 ~ 22998282 (+)
LOC103034256 flot2,LOC108411680,LOC106581211,LOC105011286,LOC106612814,LOC107727921 coding downstream 20127 23564348 ~ 23580240 (+)
LOC103033930 wbscr17,LOC108411682,LOC107714690,LOC107582595,LOC107727938 coding downstream 56197 23600418 ~ 23620855 (+)
gdpd1 gdpd1,LOC107672421 coding downstream 315824 23860045 ~ 23875492 (+)
clptm1 clptm1,LOC107715057,LOC107727917 coding downstream 437296 23981517 ~ 23996273 (+)
LOC103021374 LOC103021374,LOC108411837 coding downstream 457909 24002130 ~ 24010615 (+)
G5827 glod4,LOC106612786 non-coding upstream 116263 23410459 ~ 23415587 (+)
G5804 NA non-coding upstream 177696 23352737 ~ 23354154 (+)
G5801 dynll2a,LOC107554284,LOC103397138 non-coding upstream 192076 23335116 ~ 23339774 (+)
G5768 synrg non-coding upstream 283831 23246132 ~ 23248019 (+)
G5762 NA non-coding upstream 316483 23213691 ~ 23215367 (+)
G5845 NA non-coding downstream 38148 23582369 ~ 23637196 (+)
G5858 NA non-coding downstream 202738 23746959 ~ 23773367 (+)
G5861 tyw1,LOC108443711,LOC108278267,LOC107727925,LOC107716137,LOC107659914 non-coding downstream 239873 23784094 ~ 23824071 (+)
LOC103043618 NA non-coding downstream 282989 23827210 ~ 23828483 (+)
G5830 NA non-coding downstream 371850 23916071 ~ 23918384 (+)
G5797 srsf1a,srsf1b,LOC103029385,LOC108415197,LOC107587230,LOC107704814,LOC108278759,LOC108278234,LOC107661749 other upstream 180544 23312512 ~ 23351306 (+)
LOC103024639 NA other upstream 375484 23081391 ~ 23156366 (+)
G5646 NA other upstream 566926 22964060 ~ 22964924 (+)
G5620 LOC107694033,LOC107752375,LOC107592755,LOC105030986 other upstream 608769 22902766 ~ 22923081 (+)
LOC103045948 grm5b,LOC108411478,LOC107670133,LOC107737424,LOC107731813,LOC107669866 other upstream 773637 22708912 ~ 22758213 (+)
G5871 NA other downstream 288015 23832236 ~ 23833830 (+)
LOC103035426 NA other downstream 295772 23839993 ~ 23847367 (+)
LOC103022942 LOC106931471,LOC106940241,LOC101067200,LOC107659943,LOC106603438 other downstream 332778 23876999 ~ 23907474 (+)
LOC103027586 LOC108425877 other downstream 1867973 25412194 ~ 25428351 (+)
G6576 ywhae,ywhae1,LOC107690422,LOC107578326 other downstream 2495935 26040156 ~ 26046246 (+)

Expression


Co-expression Network