tas2r4


Basic Information

Item Value
gene id tas2r4
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035897.1
NCBI id CM008300.1
chromosome length 26953843
location 22782092 ~ 22783649 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007248674.2
CGTATGCATGCTCGAGTACATGCTCAGTTAACCTCCCAGTGGATCAACATAATGGGCTTAGACACATTCATCCTGCAGTTAATTGCTATAGTGGTCCTGGTTTGTACTGGGGTGATGTGGAACTCCTTTAACCTCATCGCGACCATCCGAATGCAGCTGAAGACCAAGGGCATTCAAACCATGATCCTGATCatattctctttctccttcagcAACGTTATTCTGGTACTGTCCTGCTTCGCTATTGTTCTGTTTGTTACCTTAGATCCAGTGTTCATGTGCACCAAGATTGAGGCACACCATTTAATATTGGTATATATGTGGCTGAGCAGCAGCTGTGTGAGCTTCTGGTCCATAGCATTGCTGAGTGTATTGCACTGTGTGAAGGTTGTGAGCTTTTCCATTGGTTGTTTCAATGCCTTAAAGAAGAACATCTCCAGAATCACCAACATTGCACTACTGCTCATCTGCCTGGGTTCCTTCCTGCTCTTCATTCCTTTCTTCACTCTCTACATTCCTAAAGTCACGGCCACAAACACGACTATTGGAATCAATGGAACCAACGTAACCACCAATACCTCAAACACCACAACTAAAACATGCCCATTGCCCTCATTATCTCCTCAGATTTCTACGCCGCTCTACACTCTGCTTTATATGTCCTTCCTCTGCCCTATCCCTTTGATGATCATGATGACCACCTCTCTCAGGATGGTGATCCACCTGTGTCAACATGTACTGTCTCTCAGCAAGAACCAGACCCAAGTCCAGAGTCTAGACTCCTATCTGTTCATCTGCAAGCTGAACATCTCCCTAGTAGGCGTCTATCTCATTACTCTGGCAATCGTGAGCATTTTCTTCATCTTGAAGATGTTGGAGCTGACCGTGAGCTACCTCCTGATAATATTTGGCTTCTCTTTGTACTGCATCATGACTGCTGCCCTCTTGACTGCGTCCACCAAGAAGCTGAGGGAGAAGTTCTGGAGGATGATCTGCtgtaaagaaacaaagaaacaatagCAAACAAAGGAACAAGACAGATGAAGGACACGGAGAACAAACCGGATTCTTCCAGCAGAAGCTCTGGATCAAACCAAAGGGTGTCAGGCATCCAAACATGTGGACTGCCTCTGTGCAGGACTAAACACAAGGAAGAAGAAAGAACTTAacc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007248674.2 True 1171 mRNA 0.45 2 22782092 22783649

Neighbor

gene id symbol gene type direction distance location
rab38 rab38,rab38a,LOC103046565,LOC107570108,LOC107731817,LOC107558848 coding upstream 3787 22771799 ~ 22778305 (+)
ctsc ctsc,LOC107731820,LOC104952660,LOC107735775 coding upstream 11442 22763337 ~ 22770650 (+)
nox4 nox4 coding upstream 89421 22672055 ~ 22692671 (+)
LOC103041960 NA coding upstream 140238 22629061 ~ 22641854 (+)
numa1 NA coding upstream 154064 22607823 ~ 22628028 (+)
c2cd3 NA coding downstream 1425 22785074 ~ 22812616 (+)
LOC103047173 LOC108410854,LOC107582651 coding downstream 29051 22812700 ~ 22830078 (+)
LOC103047689 NA coding downstream 52152 22835801 ~ 22838427 (+)
LOC103021718 LOC108410847,LOC107758659,LOC107582611,LOC107592752,LOC107752380 coding downstream 78729 22862378 ~ 22867050 (+)
LOC103022249 NA coding downstream 97188 22880837 ~ 22893099 (+)
G5595 NA non-coding upstream 74323 22707113 ~ 22707769 (+)
G5455 NA non-coding upstream 436310 22344076 ~ 22345782 (+)
G5416 NA non-coding upstream 567041 22214411 ~ 22215051 (+)
G5379 NA non-coding upstream 584607 22169112 ~ 22197485 (+)
G5619 NA non-coding downstream 39222 22822871 ~ 22824066 (+)
G5628 NA non-coding downstream 121489 22905138 ~ 22905655 (+)
G5640 rab34a,LOC103022556,LOC108443499,LOC107758713,LOC107672399,LOC107657101 non-coding downstream 166178 22949827 ~ 22951675 (+)
G5642 LOC108443500 non-coding downstream 172411 22956060 ~ 22958499 (+)
LOC111192542 NA non-coding downstream 184342 22967991 ~ 22974947 (+)
LOC103045948 grm5b,LOC108411478,LOC107670133,LOC107737424,LOC107731813,LOC107669866 other upstream 23879 22708912 ~ 22758213 (+)
LOC103041654 chordc1,LOC108412466 other upstream 108108 22642610 ~ 22673984 (+)
LOC103043812 gria4a,gria4,LOC107725765,LOC107670112,LOC107689577,LOC107566895,LOC107560842,LOC107756206,LOC107756230 other upstream 257346 22407556 ~ 22524746 (+)
LOC103022859 fgf12,fgf12b,fgf12a,LOC108411839,LOC108278337,LOC107689585,LOC108436038 other upstream 627166 22056522 ~ 22154926 (+)
G5026 NA other upstream 1782892 20983707 ~ 20999200 (+)
G5620 LOC107694033,LOC107752375,LOC107592755,LOC105030986 other downstream 119117 22902766 ~ 22923081 (+)
G5646 NA other downstream 180411 22964060 ~ 22964924 (+)
LOC103024639 NA other downstream 297742 23081391 ~ 23156366 (+)
G5797 srsf1a,srsf1b,LOC103029385,LOC108415197,LOC107587230,LOC107704814,LOC108278759,LOC108278234,LOC107661749 other downstream 528863 23312512 ~ 23351306 (+)
G5871 NA other downstream 1048587 23832236 ~ 23833830 (+)

Expression


Co-expression Network