LOC103042574


Basic Information

Item Value
gene id LOC103042574
gene name NA
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035897.1
NCBI id CM008300.1
chromosome length 26953843
location 26919291 ~ 26931495 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_015604965.2
GGGActgcacggtttgacagggtagcacatcTTGACATAGCACTGGTGGCGGGAGCGCGGTGATGAGACTGAGAGCATGTCAGGACTTGTTGTAGGACCGATGGAGGGAAATGGGCGTGGTATGAGGAGGCCGTTTCGCGGGAGTGAAAGCTTCGGCTGTCATTAGCGCTCTGCTctgacaaaaacaacagcacaacTATTTACTATCGCGCTCTGAGTCAGAGACTGGATGTTAACCACGCTGTCATGCGCGGACTATAACCCGGCGGAGAGAGAAAGCGGAGTAACGCTGGATCAAAACATGCGCGCTGAGTAAGCGGCACTACTtctgcggagagagagagagagagaagcgtgTTTAGGAGAAGCAGCGGAGAAGCACTTGCTGATTGATAAAGGACTGTTTTCAGTTGTCAAAGGTGGTGCTTGTTATGGCCCGCCCGCAAATGGACAGCAGGGCGGATGGTCAGAGTCCCACATCGCAACAGAGCTGCAGAATGGAGGCGTTACGCCGGGATGTCTGGCCCAGTGGAAGCACACAGCCGGCGCCTCAGCCACGCCGCCGGCACCGGACTACAGCCAATCAAACGAGCCCTGCCCCTCAGCCCCTTGCCCCGATGCAAGATGCCTTGAGTGAGCCCAGGGTCCCCCAGCAGAATAGTCTTCTCAGAGACAACACAAGCACTGCAGGAACAGAGCAAGAGCGACCCCGGCCCACTGAGAGTAACCAGCCCCTGCCTGATCTCCTGCTCCAAAGCCACAGCTCTTCATCCAACTCAAGCCACAGAGACTCCCCTGCAGACGAAGAGCCCACGCCAGAGGAACAAGCCATCCACCGAGTGGCCATTCAGCTGAGGACCATAGGAGATGAGATGAATACAGTTTACCTTCAGAGAAGGAATGAAGCTCCACAATGGCAGAACTGGAGGGGCCTGTACCGAGGTCTGGTGGCCTTCCTGGCTGACACAATCAGCACCCTCTACCAGCATGGGCTGAGATGAACGGGTATATCGGACTCTTGTGGGGGGAGGTGGTGAAGTGCTGGCACTTCTCAACATAACCACTAATGAACTGCACTGGCTCTGGAAAAATTCTGCAGGATCAGaatgatttgttttgttttatttcttttattcgtTTGTGCTGTTGTAAAtgttgtatatttgttttttgttcttttatctTTTTGGGAGGAGTTATATGTAGCATGTGACTGAAGTGTGTGTGCCGGTGGGGGCGGGTGGAAGTCTGTGTGCCTCTCTGGATCTCTAAACTGTGAAGCACAATCGGTTGGACTTTTTGCTGACTTCAGTCAAAAGGCCTGGATACTTAGAGGAGCGGAGTCAGGGCAGCTTGTTTTTAGGTGATGGAAAATAGATTTATAAGGAAAATAGATCTATAAGGAAAATAGATTTAACAGGTTAAACATTATAGGATGTCAATGGCAGCTGCTGCTTTTACAAGGTGATATTACAGCAACAATTCATATACAGAATCATTTCCCATGTATTTCATTGTAAATCTAAATTGTTTTCACTTTATTTGACTGTCATTGTTAATGCTATAGACCCCTTATCACTTTGACCAGCATTAACCTCCAGCATTAAGCTATATTCGATATCATTTAAGACACTAGTTTTGTCTCAAAGCCCATTGCCAAAAAATTGCTTCAGAGTATCCAGGTCCTTTAGACAGCACTAATTTGGATGGTTGGGTTGGCTTGTACCTCCTCAGGCTCTGAAATATGCTGTATGTGCTACGGGACATGCTCTTAGCTGCCTTACAGAGCAATACTGCCGCACAATCAGTCACCAACGTTGCAGTAAGGCATGCCCACACACCGCTAAAAAGGGAGGAAAAGACAGGGTCGTACAAACTGTGACTGTCAAAAAAGGACACGCACACGTCTTTTACACCGAACCCAGCATGGCGAATGTGCCTTACATcgccctttttaaaaaaaagcctaCACACGCTTGTTCCATCAGGGTTGATCAGTGAACAGTGTGTGGGGGCGTCAATGGTCAGTGCCTTGGTGCTCCCACCTGTATTTACACTTCTGGACGCAAAATTCACACCTCATTTCAAAGATTGGTCACCTCCAATGGAGGCACTCAGATTGTGGCCGGGAAGCCTTGTGGCCAGGCCAGACTAGATCAGGCCACAGGTTCTCTATAGTGGCCAGGCCAGACTAGATCAGGCCACAGGTTCTCTATATGGCTGGGTAGCAGTGTTAATATTTGTAATGAAGCATGTATGTaaataatttgggagaaaaaaggaaagagatgGAAGGAACTGGCCATTCTCTTTCTGATGCATTATGTATATTTTGAAGATAAAAACCTTAAAAGTACTTAAcagttccttgttttttttttgttttttgtttttgtttgaaagcagtacaACACgtttaactgtttttctgagccTTTTGGACCAATGCTGGGAAATAAAGTACATACTTTAATCCAGTGCATAtttaacagttcagaaaaaagtaccttttttaAGAACTAAGgtttagttagctaacattCCCCTTACAAGTATATGATATATGTCTGTGCCTGAGAAACAGAGATGAGAGgtgtaaactatttattttgtatgtcCATTTCTATACTTGGTCCTTAGTGATGAGTAGGGGGTTGTTAAAGCAGAGTtaagtttaatgtttaaagttattttcatgaattgtttcttttttctcaaaAAAGTTGGCTTAAAAGCAAGGCAAGAGGTTTGCAAATAGTCAAGAAGATGGAATGAGCATGGAGATACAGTTCTGTTATCTGGGAACCCTTACTGTACATTTCTGTATTCGGTATCAATGTTTCTTAGTAAAATACAATCTGTAAACATTGCCCTCAACAAAACTACAGCAGAACTGATCTGAATTTATTTGTTCTGCAGCAATGCAATCAATCAGTGGAGATGAATTTGCTTTCAGGTGGATAGATGGATTAtgctatttaaaaacaaatctgaGCCAGACCTTTTTTACTTGAAAAACAAACTTTCAGCACTCAATCTGTGGATGTTCACCATTATTTTGGGACAATAACTCTCTGGGGCCTTCAACTGCATGACTTGTTGCCATAGCTCTTACATGGACTTCACTGGTGCATATCTAACATGGGTTTCCTTCAAAGAGCTTCCCTTACAAACCACTGTTTTACTGTCTTGTGGGTAAACCATGTGAGAAACCTTGTTAGCACTcgccgttttctttttttttcttttgccgtCTTTTTTATCTCTGTACTGTATCTCCAAACATACTGAGTACTAAAGGTCTCCCGTGACTGCCTGTCTCATGACTTCCTGTGCAAAAGCAGTGGTGGAGGCCGCCTTCTGTGACCGTCCTGTGACTTCTTGTGGATAGGTGTGTTTTCTGATGCACTGTCGCTTGGAGGGAAAGGCCTTAAGTGTACTGTGAACATCACACTACACTCATGCTCAAGTCAATCTCAATTTCTAGCCTTGTACATTTGCCGTTTGGACTTTTTTCTATGTACAATTtctatattgttatttttttctttgccttttttaaataaatataagaatTCAGACA
>XR_002650136.1
GGGActgcacggtttgacagggtagcacatcTTGACATAGCACTGGTGGCGGGAGCGCGGTGATGAGACTGAGAGCATGTCAGGACTTGTTGTAGGACCGATGGAGGGAAATGGGCGTGGTATGAGGAGGCCGTTTCGCGGGAGTGAAAGCTTCGGCTGTCATTAGCGCTCTGCTctgacaaaaacaacagcacaacTATTTACTATCGCGCTCTGAGTCAGAGACTGGATGTTAACCACGCTGTCATGCGCGGACTATAACCCGGCGGAGAGAGAAAGCGGAGTAACGCTGGATCAAAACATGCGCGCTGAGTAAGCGGCACTACTtctgcggagagagagagagagagaagcgtgTTTAGGAGAAGCAGCGGAGAAGCACTTGCTGATTGATAAAGGACTGTTTTCAGTTGTCAAAGGTGGTGCTTGTTATGGCCCGCCCGCAAATGGACAGCAGGGCGGATGGTCAGAGTCCCACATCGCAACAGAGCTGCAGAATGGAGGCGTTACGCCGGGATGTCTGGCCCAGTGGAAGCACACAGCCGGCGCCTCAGCCACGCCGCCGGCACCGGACTACAGCCAATCAAACGAGCCCTGCCCCTCAGCCCCTTGCCCCGATGCAAGATGCCTTGAGTGAGCCCAGGGTCCCCCAGCAGAATAGTCTTCTCAGAGACAACACAAGCACTGCAGGAACAGAGCAAGAGCGACCCCGGCCCACTGAGAGTAACCAGCCCCTGCCTGATCTCCTGCTCCAAAGCCACAGCTCTTCATCCAACTCAAGCCACAGAGACTCCCCTGCAGACGAAGAGCCCACGCCAGAGGAACAAGCCATCCACCGAGTGGCCATTCAGCTGAGGACCATAGGAGATGAGATGAATACAGTTTACCTTCAGAGAAGGAATGAAGCTCCACAATGGCAGAACTGGAGGGGCCTGTACCGAGGTCTGGTGGCCTTCCTGGCTGACACAATCAGCACCCTCTACCAGCATGGGCTGAGATGAACGGGTATATCGGACTCTTGTGGGGGGAGGTGGTGAAGTGCTGGCACTTCTCAACATAACCACTAATGAACTGCACTGGCTCTGGAAAAATTCTGCAGGATCAGaatgatttgttttgttttatttcttttattcgtTTGTGCTGTTGTAAAtgttgtatatttgttttttgttcttttatctTTTTGGGAGGAGTTATATGTAGCATGTGACTGAAGTGTGTGTGCCGGTGGGGGCGGGTGGAAGTCTGTGTGCCTCTCTGGATCTCTAAACTGTGAAGCACAATCGGTTGGACTTTTTGCTGACTTCAGTCAAAAGGCCTGGATACTTAGAGGAGCGGAGTCAGGGCAGCTTGTTTTTAGGTGATGGAAAATAGATTTATAAGGAAAATAGATCTATAAGGAAAATAGATTTAACAGGTTAAACATTATAGGATGTCAATGGCAGCTGCTGCTTTTACAAGGTGATATTACAGCAACAATTCATATACAGAATCATTTCCCATGTATTTCATTGTAAATCTAAATTGTTTTCACTTTATTTGACTGTCATTGTTAATGCTATAGACCCCTTATCACTTTGACCAGCATTAACCTCCAGCATTAAGCTATATTCGATATCATTTAAGACACTAGTTTTGTCTCAAAGCCCATTGCCAAAAAATTGCTTCAGAGTATCCAGGTCCTTTAGACAGCACTAATTTGGATGGTTGGGTTGGCTTGTACCTCCTCAGGCTCTGAAATATGCTGTATGTGCTACGGGACATGCTCTTAGCTGCCTTACAGAGCAATACTGCCGCACAATCAGTCACCAACGTTGCAGTAAGGCATGCCCACACACCGCTAAAAAGGGAGGAAAAGACAGGGTCGTACAAACTGTGACTGTCAAAAAAGGACACGCACACGTCTTTTACACCGAACCCAGCATGGCGAATGTGCCTTACATcgccctttttaaaaaaaagcctaCACACGCTTGTTCCATCAGGGTTGATCAGTGAACAGTGTGTGGGGGCGTCAATGGTCAGTGCCTTGGTGCTCCCACCTGTATTTACACTTCTGGACGCAAAATTCACACCTCATTTCAAAGATTGGTCACCTCCAATGGAGGCACTCAGATTGTGGCCGGGAAGCCTTGTGGCCAGGCCAGACTAGATCAGGCCACAGGTTCTCTATATGGCTGGGTAGCAGTGTTAATATTTGTAATGAAGCATGTATGTaaataatttgggagaaaaaaggaaagagatgGAAGGAACTGGCCATTCTCTTTCTGATGCATTATGTATATTTTGAAGATAAAAACCTTAAAAGTACTTAAcagttccttgttttttttttgttttttgtttttgtttgaaagcagtacaACACgtttaactgtttttctgagccTTTTGGACCAATGCTGGGAAATAAAGTACATACTTTAATCCAGTGCATAtttaacagttcagaaaaaagtaccttttttaAGAACTAAGgtttagttagctaacattCCCCTTACAAGTATATGATATATGTCTGTGCCTGAGAAACAGAGATGAGAGgtgtaaactatttattttgtatgtcCATTTCTATACTTGGTCCTTAGTGATGAGTAGGGGGTTGTTAAAGCAGAGTtaagtttaatgtttaaagttattttcatgaattgtttcttttttctcaaaAAAGTTGGCTTAAAAGCAAGGCAAGAGGTTTGCAAATAGTCAAGAAGATGGAATGAGCATGGAGATACAGTTCTGTTATCTGGGAACCCTTACTGTACATTTCTGTATTCGGTATCAATGTTTCTTAGTAAAATACAATCTGTAAACATTGCCCTCAACAAAACTACAGCAGAACTGATCTGAATTTATTTGTTCTGCAGCAATGCAATCAATCAGTGGAGATGAATTTGCTTTCAGGTGGATAGATGGATTAtgctatttaaaaacaaatctgaGCCAGACCTTTTTTACTTGAAAAACAAACTTTCAGCACTCAATCTGTGGATGTTCACCATTATTTTGGGACAATAACTCTCTGGGGCCTTCAACTGCATGACTTGTTGCCATAGCTCTTACATGGACTTCACTGGTGCATATCTAACATGGGTTTCCTTCAAAGAGCTTCCCTTACAAACCACTGTTTTACTGTCTTGTGGGTAAACCATGTGAGAAACCTTGTTAGCACTcgccgttttctttttttttcttttgccgtCTTTTTTATCTCTGTACTGTATCTCCAAACATACTGAGTACTAAAGGTCTCCCGTGACTGCCTGTCTCATGACTTCCTGTGCAAAAGCAGTGGTGGAGGCCGCCTTCTGTGACCGTCCTGTGACTTCTTGTGGATAGGTGTGTTTTCTGATGCACTGTCGCTTGGAGGGAAAGGCCTTAAGTGTACTGTGAACATCACACTACACTCATGCTCAAGTCAATCTCAATTTCTAGCCTTGTACATTTGCCGTTTGGACTTTTTTCTATGTACAATTtctatattgttatttttttctttgccttttttaaataaatataagaatTCAGACA

Function

GO:

id name namespace
GO:0043280 positive regulation of cysteine-type endopeptidase activity involved in apoptotic process biological_process
GO:0043065 positive regulation of apoptotic process biological_process
GO:0070059 intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_015604965.2 True 3583 mRNA 0.44 4 26919291 26931495
XR_002650136.1 False 3543 misc_RNA 0.44 5 26919291 26931495

Neighbor

gene id symbol gene type direction distance location
rad1 rad1,LOC107601739,LOC107585563,LOC107718285 coding upstream 20990 26894658 ~ 26898301 (+)
tmem97 tmem97 coding upstream 30753 26886050 ~ 26888538 (+)
LOC103040422 LOC108277907,LOC108425840,LOC107734097,LOC107690476,LOC107690468 coding upstream 35294 26867235 ~ 26883997 (+)
usp32 usp32,LOC108425843 coding upstream 52132 26789609 ~ 26867159 (+)
appbp2 appbp2 coding upstream 141303 26763745 ~ 26777988 (+)
G6756 NA non-coding upstream 825 26839041 ~ 26918466 (+)
G6765 NA non-coding upstream 2761 26913401 ~ 26916530 (+)
G6759 NA non-coding upstream 27725 26889213 ~ 26891566 (+)
G6711 NA non-coding upstream 310549 26583279 ~ 26608742 (+)
LOC111192717 NA non-coding upstream 426555 26487773 ~ 26492736 (+)
G6576 ywhae,ywhae1,LOC107690422,LOC107578326 other upstream 873045 26040156 ~ 26046246 (+)
LOC103027586 LOC108425877 other upstream 1490940 25412194 ~ 25428351 (+)
LOC103022942 LOC106931471,LOC106940241,LOC101067200,LOC107659943,LOC106603438 other upstream 3011817 23876999 ~ 23907474 (+)
LOC103035426 NA other upstream 3071924 23839993 ~ 23847367 (+)
G5871 NA other upstream 3085461 23832236 ~ 23833830 (+)

Expression


Co-expression Network