LOC111192513


Basic Information

Item Value
gene id LOC111192513
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035897.1
NCBI id CM008300.1
chromosome length 26953843
location 22128934 ~ 22130477 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022669727.1
GAGAAAGATTTTGCGGAACTGGAGGAATTTTTTAAAGATGATTGGACACCAAGATCACAGCGCTGAATGGCGAACAACAGTATTGAAACACAACCCACAGCAAGATGCGAGCAGCTGTGGCGttttagtgctaaagTTCGCAGAAGATTTTCTTTCTACTGGAGCTATCGACAATGTGCAGACAACACAAGCAGCTATTAGCACCGCCCGAATGGGGATAGCCTGTTCATTGCTTGAACGTAAAGGCAATGCAGAGGACTACTGCACAGTTTGCTCTATGCTGGAAGGGGATGGAGACAAGAGCATGACTGAAATGgtgcagTGTGATGTGTGCAGTCGCTGGGCACATTTTGAATGTGTCCAATATAGTAAAGAGATTTCCGCCAACTACCACTGTAGAAAGTGTACAGTTAACAAATAACctgaatgtattttttcctGGATTAAGCTGCACTTTGcactgtttgttttaaaatgtaaaatctaagtacactgtataatatgtttataaaaatgtgtgttattGGATTACAATGCAATGTTCAACTTAATTAGTAAAAGTATTAGCAAaccatgagaaaaaaaaactttggggaTTCAGTAAAATCACAGTGAACCTTAATCAACTCCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022669727.1 True 632 mRNA 0.40 5 22128934 22130477

Neighbor

gene id symbol gene type direction distance location
parl parl,LOC107670111,LOC107689587 coding downstream 81956 22036488 ~ 22046978 (-)
stard10 stard10,LOC108278271,LOC106581404 coding downstream 310987 21776231 ~ 21817947 (-)
arap1 arap1 coding downstream 362344 21655023 ~ 21766590 (-)
pde2a pde2a coding downstream 513282 21282296 ~ 21615652 (-)
LOC103031705 NA coding downstream 1160846 20954003 ~ 20968088 (-)
fzd4 fzd4,LOC107600811,LOC107551868 coding upstream 70280 22200757 ~ 22210913 (-)
pdgfd pdgfd coding upstream 213562 22344039 ~ 22366316 (-)
msantd4 msantd4 coding upstream 370621 22501098 ~ 22506707 (-)
gucy1a2 gucy1a2,LOC107706059,LOC107669873 coding upstream 391187 22521664 ~ 22551935 (-)
cwf19l2 cwf19l2 coding upstream 423981 22554458 ~ 22574424 (-)
G5401 NA non-coding downstream 4684 22121889 ~ 22124250 (-)
G5400 NA non-coding downstream 8465 22118260 ~ 22120469 (-)
G5392 NA non-coding downstream 20718 22041654 ~ 22108216 (-)
G5393 NA non-coding downstream 23933 22100401 ~ 22105001 (-)
G5352 NA non-coding downstream 182662 21941517 ~ 21946272 (-)
G5414 NA non-coding upstream 62540 22193017 ~ 22193934 (-)
G5537 lamtor1,LOC106581407 non-coding upstream 343003 22473480 ~ 22603357 (-)
G5541 LOC107756230,LOC107756206,LOC107689577,LOC107670112,LOC107725765 non-coding upstream 361573 22492050 ~ 22496877 (-)
G5570 NA non-coding upstream 507581 22638058 ~ 22641835 (-)
G5568 NA non-coding upstream 517892 22648369 ~ 22649909 (-)
LOC111192507 NA other downstream 167469 21946786 ~ 21961465 (-)
inppl1 inppl1,inppl1a,LOC108261207 other downstream 188128 21916366 ~ 21940806 (-)
G5095 eif4g1 other downstream 1491866 20630225 ~ 20637068 (-)
LOC111192876 NA other downstream 1636410 20486594 ~ 20492524 (-)
LOC103038464 NA other downstream 2473021 19652786 ~ 19655913 (-)
G5396 NA other upstream 757 22131234 ~ 22200308 (-)
G5407 NA other upstream 25308 22155785 ~ 22158185 (-)
G5565 NA other upstream 477292 22607769 ~ 22628182 (-)
G5667 c2cd3 other upstream 665868 22796345 ~ 22798290 (-)
LOC103028862 dynll2a,LOC107554284,LOC103397138 other upstream 1204589 23335066 ~ 23339735 (-)

Expression


Co-expression Network