gucy1a2 (gucy1a2,LOC107706059,LOC107669873)


Basic Information

Item Value
gene id gucy1a2
gene name gucy1a2,LOC107706059,LOC107669873
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035897.1
NCBI id CM008300.1
chromosome length 26953843
location 22521664 ~ 22551935 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022669775.1
atttctctctctccatttctctctctctctctctctttctttaggaGTGGGAGGGGTCAGTATCTCgcgctgctgctgatgctgctgtagGGAACCTCGCGccgcttttctctctctctctctgatcctCGTGCGTGCGTGTGGATGAAAGCCCGCGCGCGCGTCCGTGATGCGGGACCGGCCAGTGCGCGAGCCACGACATAACACAACGACGGACCGCGCGCGCAAGACCCCGGAGCCGCCGCGTGCGTTGCGTTGCGTGAGATGAGCGCGTGACCCCCGCAGCATGTCCACGCGGAAGGTCTCGTCCGAGTCGTTTAGCTCCGCGAGCTCGGAGTGCGTGGAGAGCCCTGAGCGCGCGGACTGGCCGGACTGCCCGCTCGCGCTCTGGAACGGACGCAGCCCTGTGCGCGCGGCGCCCCGGCGCAGGAGGCGCGTGAACCTGGACTCACTAGGGGAGAGTCTGAGGAGACTGACATCACCCACGacaCAGACTATTCAGCAGGCCCTGCAGAGAACTGTGGAATTCTATAGACAAAGAAATGCCAGtagtgcagACGGTTCTGgagaaaagtgtgtgtttgagaagtGTCCGTTTGTAAACTCACAATCCGAAGACCAAACTGACATCTCAGGAATACTCCAGTACACAGCGGCAATAGTGGGTGTTGGGTTCCCTACTCTGCGTGAGCGTTTTGGGGAGGAGTTTTTCGGCCTGTGCCTGGAAGAGAATGAAAGGGTTCTGCGTTCTCTGGGCGGAAACCTACAGGATTTCTTTAATGGATTTGACGCTCTGTTGGAACATGCTCGGACCTCGTACGGACGCCGGGCGTCCTGGGAGTCGCCCTCTTTCCTGTGCAAAGACGCTCgCAAAAGAACTCTCATCCTGCACTGCTTCAACCCCGACCCCACGGTGGGCGTGGCCATGCCGGGCCTGATCCGGGCGGCTGCTCACCGGATTTACCAGTCAGAGGTTCAGGTGGAGGAGACCGACCCTAATTGGCTCTATGCGGCCAATGAGGATGGAGAGCTGTCCGCAGACTCCACCCCCTCTTCATCTCCGTCCCCGCCCACTTCCTCGCCCCCGGCCTGCCTGTCTTTCCTCATAAGAGAGGTCAGGACATCCTCGTCATGCTCCTCTTCCTCACGGCAGCTGTCACGCTCACCTTCGGACTTACGGATCGGCCTCAGCACGTTCTGCCGGGCGTGTCCGTTCCACCTGGTCATCGGCCCCAGCATGGAGGTGCTGCAGGTGGGGGAAGGGCTGAGGCAGGTTGGGGAGGGTCTTAGGAAGCCACACCGGACACTGAGTTTTAGTGACAGCTTCCAGTTGGTTTCTCCCAGGATTCCATGCTCTTTCCAGAACATTCTGCTGCGTCTGGCCACGCCGTTCACCATCCGCACACGGCCTGACGCGTCCACGCTGGACAGCAAGGAGAAGGTGATGGAGCTGAAAGGCCAGATGATCCATCTCCCCGAGTCCAACTCCATAATGTTCCTGGGCTCACCACGCGTTGATAGGCTGGAGGAACTAATGGGGCGGGGCTTACATCTTTCAGATATCCCTATTCATGACGCGACCCGTGATGTCATCCTGgtagGTGAGCAGGCCAAGGCTCAGGATGGCCTGAAGAAGCGCATGGACAAGCTGAAGGCCACTCTGGAGCGGACGCACCAGGCTCTGGAGGAGGAGAAGCGGCGGACGGTGGAGCTGCTGTACTCCATCTTCCCGGGGGGCGTGGCCCAGCGACTGTGGCAGGGCCTCCCGGTACAGGCCAAGAAGTTTGATGATGTCACCATGCTGTTCTCTGACATCGTGGGCTTCACAGCCGTCTGCGCCCAGTGCACCCCCATGCAGGTCATCAGCATGCTGAACGAGCTGTACACACGCTTTGACTACCAGTGTGGAGTACTGGACGTGTACAAgATAGAGACAATAGGGGATGCGTACTGTGTGGCTGCAGGGCTCCATAAGAAGTGTGAAAGCCACGCTCGGCCGATCGCCCTCATGGCCCTGAAGATGATGGAGCTCTCTGAAGAGGTTCTCACGCCAGATGCCAAACCCATACAGctgcgTATAGGGATCCACTCAGGCTCAGTTCTGGCAGGGGTTGTTGGGGTGAAGATGCCACGGTACTGCCTGTTCGGAAACAACGTCACACTGGCCAGCAAGTTTGAGTCCGGCAGCAAACCACGCTGTGTCAATGTCAGTCCCACCACCTACcaactCCTGCGAGATGATCGGTCCTTCTCTTTCATCCCTCGATCGCGCCAGGAGCTTCCTGACAACTTTCCCAAAGAGATCCCGGGAATTTGTTACTTCCTGGAGGCGGGCAGGTCCCATAGCCACGCCCCTCTGACCAGCACTCGCTCCGCCCCCATCCGAAAGGTGTCCTATAATATTGGGACCATGTTTCTACGGGAGACCAGCCTCTGAGATAACACCGCCCACCTACTACTATAAACCATGCCTTGCAGGCTAGCGCTGCCCTTGGCAACCAGTCGCTCCGCCTCTCGGACACAGCACTCCGCCCCCAGGGGTGAACATACGAGAAGGACTGACGGAAGAGACGTGAATATTCACAAATATtcaaatgttactttaaaaagacttggaaattatatatttgaataaatatatatatataatatatatatttgcataaagCCTTCTGCTCCACACAACATGCTCAATTGTattcaaatacatacacacacacaaacacagaaacaataCATACCAATAATagtattcataataataataataatacagtgctACACTAAATAtctgtgtatacacacacacaaacacacacacacacacacagttgtcaGCACTGTAGGACATAGACAGGATTAACATACAGAACCTGGtgccttctaataaatgcacaGTGTTATTCACCCCAGCACCCTCCACCCACCCAGACTGCCCCCCAGGTCAGTTCACAATCATGTGACTAGTTCATGTTGTTGCAGTTTTGTGTACCGAGCTCTAAAAGAGACCCAAGAAATTCCGGAAACCTTACCACACTCACCAGAAACGTCTCCATTCACCAGAGACGACTGCACACTCACTAGAAACGTCTGCATTAACTAGAGACGTCTGCACACTCACCAGAAATGTCTGCATTCACCAGAGACGACTGCAAACTCACCAGAAATGTCTGCATTCACCAGAGACGACTGCACACTCACCAGAAACGTCTGCACACTCACCAGAGACATCTGCACACTCACCAGAAACGTCTGCACACTCACCAGAAACGTCTGCACACTCACCAGACACGACTGCGTACTCACCAGAAACGTCTGCATTCACCAGAGACGTCTGCACACTCACCAAAAACTTCTGCATTCACCAGAGATGTCTGCTGATTCACCAGTGACGTCTGCAGACTCACCAGGGATTCCACGCTCACTAGAAATATCTGCATTCACCAGAGACGTCTGCACACTCACCAGAAACATCTGCATTCACCAGAGATGTCTGCACACTCACCAGAGATATTTACTTTCACAATAGATGTCTGAGTCCTCACCAGAGTCATCTGTGCTCACCAGGTATGTGTATGCAGAGATGTCTGCCCATTCACTAGACTTCTGCACTTACCAGAGATGTCTGCACATTCACCAGAGATGTCTGCCTAGTCAACAGTGACGTCTGCCTACTCACCAGAGACATTTCTGGCCTCTCACCAGGAATGTATGCACACTTACCAGGGATATCTCCACGCTCACCACATTTGTCCATTCACAAGAAATGTCTGCCCACTCACCAGGGACCTCTGTCCACTTACCAGGGAAGTCTGCCCACTCACCAGGAACATCTGCCCGCTCACCAGGGATGTCTGCTCTTTTAACAGAGCTGTCTTTGCTCACCAGATGTGTGTACATTCACCAGAGATGTCTGGCCTCTAACAAGGAATGTCTGCACATGACATTTGCGCACTCACCAGAGACGTCGGCACCCTCACCAGAGACGTCTGCACCCTCACCAGGGATGtctgtgctcaccagaggtatcCTCTTTCACCATATATGTCTAAATCCTCACTAGAGATATCTGTGCTTGGCAGACATGTCTATACTCAGTTCACCAGGGATGTCGGTCCAGTCAGCAGACTTCTGCATTCACCAGAGTCTGCTCTCATCAGAGACATTTGGTAATTCAACAGGGACTTCTGAACTCACCAGACATTTGCACACCTACTAAAGATGTCTGCCCTCATCAGAGGTGTCTGCATTCACCAGAGACATCTAGACACTCACCAAGGATGTCTGCAAACTCACCAGAGAATTTGCCCACTCCCCAGAGACATCTGCTAGTTCACAAGAGACCAAGGATGTGTGCACTCATCCAAAATATCTGCTTTCACCATAGATGTCTGAATATTCACCAGAGGTGTCTGAACACTCACCAGATACATCTTCTTTCCAGTGATGTCTGCTTTCACCAGAGATTTTTGAAAACCTACCAGGGATGTCTGCACTCAGCAGACTTATGTGCACACTCATTAGTGATGTCTACATTTCCCACAAGTATCTGCATTCACCAGAGATGTCTGCATGTTCACTAGAGATTTCTGCACTTTCCAGgtacttctacttctacttaataattaatgactTGCATTCTCCAGAGATGTTTTCAAGTTTGCCAGGCAAACATATACAATTTCCAGGGAGCTTCTCAAAGGTTATGGTGAGCtcacaaaaaatgtattgtcaCTGTTTATGGTGATCAAATTATACAAGTGTGCCATTTCATGGATGTATTATTGCAGTTATAAAGGGAGTTCTGAAAAATGTTGAGTGCTCAGGAAAAAATTACATGATCAACAGGAAGTACACAAATACTGGTGAGCTCCGTAAGTTTTCTGGTGAGTGTGCAAAAGAGTAAATTTCCCAACATTAAAGCTACAgaatttcattttacatttcagggctctgtgtgtgtgagagtgtgtgtgtattatatctatatgtgtgtgtgtgtgtgtgttcgagtgtatataatgtatgtgtgtgtgtgtatgtgtgtgtctctgtccaCTGTTTGTTGCTGCTGTTATCTTCTGGAGATTGAAATGTCACTTATCTTACTCTATCAAGTCACAGCAAGCCATGACCTGTCAGTCAAACCAGCCATCCAATCACACACAGCCAACTGCTGTCAATCAGAGGTGTTCTTCCAATCACTCTTAACCTACAATTGTCAATCAAACTAGTCCCTCCAGTCGCGCCAAATCAGAAGCTGTCAATCATTTTTCACATTGCCAATAAAACCAGGCATTTGCCTACAGACACACCG

Function

symbol description
gucy1a2 Orthologous to human GUCY1A2 (guanylate cyclase 1 soluble subunit alpha 2).

NR:

description
LOW QUALITY PROTEIN: guanylate cyclase soluble subunit alpha-2-like

GO:

id name namespace
GO:0009190 cyclic nucleotide biosynthetic process biological_process
GO:0097159 organic cyclic compound binding molecular_function
GO:1901363 heterocyclic compound binding molecular_function
GO:0016849 phosphorus-oxygen lyase activity molecular_function

KEGG:

id description
K12318 GUCY1A; guanylate cyclase soluble subunit alpha

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022669775.1 True 5317 mRNA 0.51 10 22521664 22551935

Neighbor

gene id symbol gene type direction distance location
msantd4 msantd4 coding downstream 14957 22501098 ~ 22506707 (-)
pdgfd pdgfd coding downstream 155348 22344039 ~ 22366316 (-)
fzd4 fzd4,LOC107600811,LOC107551868 coding downstream 310751 22200757 ~ 22210913 (-)
LOC111192513 NA coding downstream 391187 22128934 ~ 22130477 (-)
parl parl,LOC107670111,LOC107689587 coding downstream 474686 22036488 ~ 22046978 (-)
cwf19l2 cwf19l2 coding upstream 2523 22554458 ~ 22574424 (-)
trnag-ucc_1 NA coding upstream 23542 22575477 ~ 22575548 (-)
trnag-ucc_2 NA coding upstream 24140 22576075 ~ 22576146 (-)
trnag-ucc_3 NA coding upstream 34202 22586137 ~ 22586208 (-)
folh1b folh1b,LOC107737433,LOC107670141,LOC107560856,LOC108412465,LOC107558820 coding upstream 99722 22651657 ~ 22666502 (-)
G5541 LOC107756230,LOC107756206,LOC107689577,LOC107670112,LOC107725765 non-coding downstream 24787 22492050 ~ 22496877 (-)
G5414 NA non-coding downstream 327730 22193017 ~ 22193934 (-)
G5401 NA non-coding downstream 397414 22121889 ~ 22124250 (-)
G5400 NA non-coding downstream 401195 22118260 ~ 22120469 (-)
G5393 NA non-coding downstream 416663 22100401 ~ 22105001 (-)
G5570 NA non-coding upstream 86123 22638058 ~ 22641835 (-)
G5568 NA non-coding upstream 96434 22648369 ~ 22649909 (-)
G5658 rab38,LOC103046565,LOC102778643 non-coding upstream 219844 22771779 ~ 22772067 (-)
G5682 NA non-coding upstream 317958 22869893 ~ 22871089 (-)
G5687 NA non-coding upstream 335055 22886990 ~ 22892910 (-)
G5396 NA other downstream 321356 22131234 ~ 22200308 (-)
G5407 NA other downstream 363479 22155785 ~ 22158185 (-)
LOC111192507 NA other downstream 560199 21946786 ~ 21961465 (-)
inppl1 inppl1,inppl1a,LOC108261207 other downstream 580858 21916366 ~ 21940806 (-)
G5095 eif4g1 other downstream 1884596 20630225 ~ 20637068 (-)
G5565 NA other upstream 55834 22607769 ~ 22628182 (-)
G5667 c2cd3 other upstream 244410 22796345 ~ 22798290 (-)
LOC103028862 dynll2a,LOC107554284,LOC103397138 other upstream 783131 23335066 ~ 23339735 (-)
srsf1 srsf1a,srsf1b,LOC103029385,LOC108415197,LOC107587230,LOC107704814,LOC108278759,LOC108278234 other upstream 792561 23344496 ~ 23351222 (-)
LOC103033507 fam222bb,LOC107661104 other upstream 996789 23548724 ~ 23560500 (-)

Expression


Co-expression Network