nox4 (nox4)


Basic Information

Item Value
gene id nox4
gene name nox4
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035897.1
NCBI id CM008300.1
chromosome length 26953843
location 22672055 ~ 22692671 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022669826.1
AAAAAGGCAaagacccaaaacacacatacacacacacacacatacaggtcgTCCTCGTGCGTTCGTTAGGAAGCTCGTGCCGCGAATTTACCGAGGGGACGCGCGCGGTCATGGGTTTGGTGTTGAGGAGCTGGGCGGCGAACGAAGCAGCTAAACACTGCgctgtggtgGTCTGGGTGGCTGTCAGTGCGTGGCTGTTCTGGAGAACTTTCAGGCTGTTCTCCAGTGGACCTCAATACTACTACCTGCACCAAATGCTGGGGTTAGGGCTGTGCATTAGCCGAGCGTCCGCCTCTGTTTTAAACCTCAACTGCAGTCTGGTTCTGCTGCCCATGTGCCGGTCCATCCTGACTGTTCTAAGAGGAACACAGCaggtAAACAGTAGGAAAGCTCGTCGATTGTTGGATAAGAGTAAAACCTTCCATGTTGTCTGTGGAGTCTCCATATGTGTTTTCTCTGtggTTCATGTTTGCGCCCATCTGGTGAATGCCGTCAGTTTTTCTGTGAGATACTCAGATGACTTTCCTGCACTGAATGTAGCACAACACCGAggacagGACCCGCGTATTCTCATCCTGACCACAGTTCCTGGGATTACTGGTGTCATCCTGGTCCTGATTTTGTTCCTGATGTTCACAGCATCTTCCTACAGCATACGGGTTTGTAACTATGAGATATTCTGGTATACGCACAACCTCTTCATCCTCTTCTACATCATACTGATGCTGCATGTGGTCGGAGGGGCTCTGAAGTACCAGACGAATGTCGACACACACCCACCCGGCTGTATACGGACCAATCAAACCAACAGTAGCTCATACACGTCGTCCAATCAGGTGCCAGAGACACAAACAAAGGCAGAGTTAAAGGAAATGCCACACATCACAGTGTGTAAAGAAGATGCCCACTTTCAGCATCATTTCCCTCAGacGTGGCTGTGGGTTACAGCACCCCTCTGTCTGTACTGTGCTGAGAGGCTGTATCGCTACATTAGAGGCAGCGCTCCGGTTACCGTAGTGTCCGTCATCAGGCACCCCTGTGATGTCATCGAATTGCGCATGCTGAAGAGCGGCTTTAAGGCCCGCCCTGGACAGTACATCTTGTTGAACTGCCCGAGTGTGTCCTCATTTGAGAACCATGCTTTTACTCTTACCGCGTGTCCAACACAGAACAAAGAAACTTTTGGCGTTCATATCCGAGTGCTCGGAGACTGGACTGAATGTTTATCTGAGCTGTTGTTTCCTGCGCTGAACCATTCTGAGATTcttcccataatgcatcagCGCACATACCCAAAGTATGcccgtgtgtatgtgtgttgcccgaaaggtacccctgctgaagagagctttgccactaagtattgagtgtgtttggcaagagggattggactcactgtatgtatgtgtgtctgttgcAGTGGGGGGTGGAGTCAGTACAGGTTGAGGAGGCTGTATGTGGTGTGGGTGTGCAGAGAGCTGCAGTGTTTCTACTGGTTTGCCAACCTGCTGTGTGACCTCCACCACAAGTTGTGGGAGGAGAATCGTCCAGATTATCTAAACATCCGGCTGTACCTTACTAACACACAGCAGCTGCagAGCTTTTCAGAGGAGCGGTTCCGTCTCCTAAGTTCCCGTCTTCTGATTGGACGACCCAGGTGGAAGGATATCTTTGGGGAGATCGGACGATCCAATCAGCAtaaaAAAGTGGGCGTGTTCTGCTGTGGTCCTAAAAGTGTCTCCAGAGAGTTACACAAACTCTGCAACTCGTTCTCCGCTTCAGGAACCGTCTTCGAGTACAACAAGGAGTCCTTCAGCTGAGACCCACAagaaccaacaacaacaacaacaaacacctCCTCCATAACCGAGGAAGACGACACCAAATGATTCTGGGATTCACAGACAAACTTTATGAGGACCTGATTGaccaaagaagaaaaaagaaaagacgaCAGAAGgactgaaaaaacaaataactgAAAGACAGTACTTAAAGCCTAAAGTACAAAAAGACTGAAGGACTAAAAACAGAGGGACATAAGGACAGTAGATTACAAGAGTAGATTATCAAGACTGAAGCACTGAAAGTCTGAGTGGAGAAGGACATTAACCTTGAAAGACTACCATACTAAAATAGTAAAAGGTTAAGACTGGAGgactaaaaaaaacttgaagGCTACAAGACTTAAATAATTGAAGTACTGAAAGACTGAAGGACTGACAACAAGGTGACAAAAAGACTGAAAGACTAAAATACCAAAGTACTGAAAGACCAAAGAACTGGAAAAATGAGGACTGAAAATATTAAAGAATGAAAGACCGAGAGACTGACATACTGAAAAAGGGTAACAATGAAAAATTGAAAGACTGAGATATAGAAACAGATGGAACAGATGGTAAACACACTGGAGTTAAAGTGAAGAGTAGACAGGCCTCAGGTCAGTCAGCGTAGACCTTGTTAAAGACCTTTATTTGTGTATCACTGTGAGAGTGCAGGTAAATTACCGGTGCTGGAGGTTCTCTGACCATTCTCAGGTGCGAGAACCTGCTTTTATTGTGTTGATGTTGAAAAATGGCGCTGATGACCAGGGTCAGACTCAAACATACAGatatttaatgagtttatatattaataatcatCTTCCACAGCAGTTTGAGTTCAGAGGAACagaataaatgtaaaagcaCCA

Function

symbol description
nox4 Enables modified amino acid binding activity. Involved in several processes, including heart process; homocysteine metabolic process; and superoxide metabolic process. Located in nucleoplasm.

NR:

description
PREDICTED: NADPH oxidase 4

GO: NA

KEGG:

id description
K21423 NOX4, RENOX; NADPH oxidase 4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022669826.1 True 2692 mRNA 0.46 19 22672055 22692671

Neighbor

gene id symbol gene type direction distance location
LOC103041960 NA coding upstream 30201 22629061 ~ 22641854 (+)
numa1 NA coding upstream 44027 22607823 ~ 22628028 (+)
lamtor1 lamtor1,LOC106581407 coding upstream 67494 22595001 ~ 22604561 (+)
trnag-ucc_6 NA coding upstream 80565 22591419 ~ 22591490 (+)
trnag-ucc_5 NA coding upstream 81483 22590501 ~ 22590572 (+)
ctsc ctsc,LOC107731820,LOC104952660,LOC107735775 coding downstream 70666 22763337 ~ 22770650 (+)
rab38 rab38,rab38a,LOC103046565,LOC107570108,LOC107731817,LOC107558848 coding downstream 79128 22771799 ~ 22778305 (+)
tas2r4 NA coding downstream 89421 22782092 ~ 22783649 (+)
c2cd3 NA coding downstream 92403 22785074 ~ 22812616 (+)
LOC103047173 LOC108410854,LOC107582651 coding downstream 120029 22812700 ~ 22830078 (+)
G5455 NA non-coding upstream 326273 22344076 ~ 22345782 (+)
G5416 NA non-coding upstream 457004 22214411 ~ 22215051 (+)
G5379 NA non-coding upstream 474570 22169112 ~ 22197485 (+)
G5382 NA non-coding upstream 478172 22192933 ~ 22193883 (+)
G5371 NA non-coding upstream 542761 22126998 ~ 22129294 (+)
G5595 NA non-coding downstream 14442 22707113 ~ 22707769 (+)
G5619 NA non-coding downstream 130200 22822871 ~ 22824066 (+)
G5628 NA non-coding downstream 212467 22905138 ~ 22905655 (+)
G5640 rab34a,LOC103022556,LOC108443499,LOC107758713,LOC107672399,LOC107657101 non-coding downstream 257156 22949827 ~ 22951675 (+)
G5642 LOC108443500 non-coding downstream 263389 22956060 ~ 22958499 (+)
LOC103043812 gria4a,gria4,LOC107725765,LOC107670112,LOC107689577,LOC107566895,LOC107560842,LOC107756206,LOC107756230 other upstream 147309 22407556 ~ 22524746 (+)
LOC103022859 fgf12,fgf12b,fgf12a,LOC108411839,LOC108278337,LOC107689585,LOC108436038 other upstream 517129 22056522 ~ 22154926 (+)
G5026 NA other upstream 1672855 20983707 ~ 20999200 (+)
LOC103037169 NA other upstream 2089181 20558523 ~ 20582874 (+)
LOC107197594 NA other upstream 2120420 20549191 ~ 20551635 (+)
LOC103045948 grm5b,LOC108411478,LOC107670133,LOC107737424,LOC107731813,LOC107669866 other downstream 16241 22708912 ~ 22758213 (+)
G5620 LOC107694033,LOC107752375,LOC107592755,LOC105030986 other downstream 210095 22902766 ~ 22923081 (+)
G5646 NA other downstream 271389 22964060 ~ 22964924 (+)
LOC103024639 NA other downstream 388720 23081391 ~ 23156366 (+)
G5797 srsf1a,srsf1b,LOC103029385,LOC108415197,LOC107587230,LOC107704814,LOC108278759,LOC108278234,LOC107661749 other downstream 619841 23312512 ~ 23351306 (+)

Expression


Co-expression Network