LOC103031751


Basic Information

Item Value
gene id LOC103031751
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035897.1
NCBI id CM008300.1
chromosome length 26953843
location 5631396 ~ 5656055 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022671296.1
TCACCACACATCCCTGCACATCACTGCTGTCTAAAACATCTTAAACATCCTTCAGGAGGAAGGAGGAGGCTTCTCCAGCTAGTTCTGCAGTCATGGTGagagtggttgctgtggtgttgctggttCTCAGCGCTCTGGGAGCTGCTATAGGAATTAAACTGGATGGAAATGGATACACTGACCTTCTTATAGCCATCAACCCAGCTGTACCTCAGAATGATGAGCTCATCAATCGAATCAAGACAATGATTACAAAAGGATCAGAATATCTGCTTGAAGCTTTAGACAGAAAGGTGTTTATCAAGGAGGTGAACATACTAGTTCCACCAACCTGGACCGGATATTCTTTCACGAAAGCAAGAAGAGAAACCTACGATAAGGCCAATGTGATCGTTGGCCACCCGAACACAGCATTCGGGGATGAGCCGTACACTAAACAGATGAAAGGCTGTGGGGAAGAGGGAGAGCACATTCACTTCACCCCAGATTTCCTCCTAAAAGACGACCTTCTCAAAGTATTCGGGCCCAGAGaaaaGGTCTTCGTCCATGAATGGGCTCATCTCAGATGGGGGGTGTTTGATGAGTACAATAAGAAGCAGCCATTCTACTGGTCCAAAAATCAACAGCTTGAACACACAAGATGTAGTGGGAAGATTGCTGGCAAGTTGTATGACGTGTCCAGTGGAAGTCCTCTTCCTTGCAGTTATGATCCGAAAACTGGTTTACCCACTAAGGGATGCAAGTTCATTCCAAACAAAGATCAAAAAACAAGCTCTTCAATCATGTTCATGCCAAGTCTAGATGCTGTTAAAACGTTTTGTGAAGATGGAGATCACAACACTGAAGCTCCGAACCGGCAGAACAAGGAATGTAACTTCAGATCTACCCGTACCATCATTTATAAACATTCAGTGGACAGTGCCGCCCTTAAGACCTTAACCCCTCTCAAGACTAAACCACCACCTCCAAAATTCAGAGTGGTCCAGAGGAAAAGTCGGGCCACCTGCCTCATCCTTGATGTCTCTGGAAGTATGAGCGGAGAGAGAATACGCCGACAGCAGCAGGCAGCTGCACTTTTCCTCAGCGAGATTGTGGAGGAGGGGGCATCTGTGGCCATCGTTCAGTTTAGTAATGATGCAAGTATTAGAAGCCCTCTGActaaaataaagggaaaagCCTCAAGAGATGCTTTAATCAAAAACCTGCCAACATCTGCAGGAGGAGGTACATACATGTGTAAAGGACTCCTGAAAAgcttagagGTGCTTAAGGCAGATGATGGAGACACAATAGGAGATGATGTGATTTTTCTGACAGACGGTGAAGCTTCAGATAACATTAATACTTGTTTTCAGACAGCGGTGAAGAGTGGTGCCATTATCAATACTTTAGCACTTGGTCCGAGTGCCTCTGTCATTCTAAAAACCATGGCAGATCAAACAGTACATCCccactctACAcgccgctctgtaactttacataatcagacaccctgctctgtaactttaaATATTCCAGGAACTGCAGAGCCTGGGGTCTGGAAATACAGCTTCCTCAACAGAAAAGCACCTGCTCAGACTATGACTTTAACAGTGACGAGTCGGGCAGCCCACGATAGCGTTCCTCCACTTATCGTTACAGCCAAGATGAACAAGCTGAGCAGTGATGGAAGTAAACCCTTGGTTGTTTATGCTGAAGTCAGTCAGAATTTGATGCCTGTTCTTGGGGCCAATGTTACTGCCACCCTGCAGTCAGATACCGGGCATTCAGTGCAACTATACCTCCTGGATAACGGAGCAGCGGCTGATAATGTTAAAGATGATGGCATCTACTCtagatattttacatatttaaagagTGGAAGGTACAgtctgaaagtgaaagtgactGACCGTACTGACACCAAACGCTCACTCGGCAAACCCAGCGGTGCTCTGTATGTCCCTGGATATATCGTGAATGGTAAAGTAGAGTTGAACCCCCAGGAGCCACCAGTAAACGTGGAGCCGGCGAATGTGGGCAGCTTCAGCAGAATAGCCACTGGAGAGAGCTTTGTGGTGAAGGTCGCATCAGGTGTCACTCCCAACTTCCCTCCAAACAGAATCCGAGACCTGAGTGCCGAATTCCAGAATGACAATGTGCTTCTCAACTGGACGGCTCCAGGAGAAATCTATGATGAGGGGACAGcTAAATCCTATGAAATCAGATGGAGTGAAAATCTGGAGATGCTTCAGAAGAATTTCAGCGGCGCTAATCTATTGAACACATCTGGACTCCAGCCAAAAGAGGCGGGCTCGGCTGAACAGCATCACTTCCTGCCGGATACCCAGATCAAAAACGGCACCACCCTGTTCTTCGCTATTCAGGCAAAGAACAAAAAGGGGGTGAAGTCTGAATTATCTAACATCGCTCGGGTCACCAAGTTCCTCCCGACTCCTGAACAACCTGCATATCCAGGCTTCAGCCTGGTCATTATTATCAAGTCTATGCTGCGGTCTTTGCTGCCGCAGTGGTAGTGCGTCTCATATCTGTTGTTATCACATCtgcaattaacaaaaaatagtcAGAATAGAGATGGCTAAAATTTACACAAGCAGTGTTTATGAGAATTTGACCAGTTTTCAGCCTATAAATCCTGACtgggcttaatccctgtctatgAAACCAGTAAATATGTAATGGCACGATAAAATGCTACCTGCCTCTCTCTGCTGTGATTAATATGCCATTTTTCAATAAACTCTTTAAGCATTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022671296.1 True 2754 mRNA 0.46 15 5631396 5656055

Neighbor

gene id symbol gene type direction distance location
LOC103026943 LOC103026943,LOC108278393 coding upstream 12560 5613743 ~ 5618836 (+)
LOC103027419 dpf1,LOC107672425,LOC107561370,LOC107749650 coding upstream 35901 5501219 ~ 5595495 (+)
numbl numbl,LOC106612624,LOC101482557,LOC108247327,LOC102206931 coding upstream 179480 5361203 ~ 5451916 (+)
coq8b coq8b,LOC108442867 coding upstream 272046 5335881 ~ 5359350 (+)
slc5a2 slc5a2,LOC107678242 coding upstream 308841 5308555 ~ 5322555 (+)
LOC111194277 NA coding downstream 661250 6317305 ~ 6327911 (+)
LOC103031157 LOC108442282,LOC107594665,LOC107710606,LOC107700523 coding downstream 725731 6381786 ~ 6405982 (+)
LOC103037029 NA coding downstream 1290768 6946823 ~ 6961558 (+)
LOC103041009 NA coding downstream 1359253 7015308 ~ 7020982 (+)
LOC111194639 NA coding downstream 1506191 7162246 ~ 7167800 (+)
G1702 NA non-coding upstream 189256 5439217 ~ 5442140 (+)
G1692 NA non-coding upstream 259544 5371341 ~ 5371852 (+)
G1639 NA non-coding upstream 326182 5303504 ~ 5305214 (+)
G1637 NA non-coding upstream 328318 5301373 ~ 5303078 (+)
G1638 NA non-coding upstream 330178 5300659 ~ 5301218 (+)
G1837 NA non-coding downstream 129771 5785826 ~ 5786057 (+)
G1873 NA non-coding downstream 272102 5928157 ~ 5928697 (+)
G1897 NA non-coding downstream 677134 6333189 ~ 6334080 (+)
G1902 NA non-coding downstream 694456 6350511 ~ 6351012 (+)
G1916 NA non-coding downstream 761268 6417323 ~ 6417565 (+)
LOC111192942 NA other upstream 354408 5250484 ~ 5276988 (+)
LOC103026740 NA other upstream 387209 5171375 ~ 5244187 (+)
G1127 LOC107669897,LOC107733923,LOC107558818 other upstream 1644668 3981824 ~ 3986728 (+)
kcne4 NA other upstream 1834848 3794819 ~ 3796548 (+)
G1045 NA other upstream 2181754 3448476 ~ 3449642 (+)
pnkp pnkp,LOC107749649,LOC107672387,LOC107561379,LOC107758514 other downstream 24971 5681026 ~ 5703183 (+)
rwdd3 rwdd3 other downstream 752791 6408846 ~ 6414794 (+)
LOC103030091 ptbp2,ptbp2b,LOC103030091,LOC108442283,LOC107594658,LOC107718150,LOC107570490,LOC108277987 other downstream 857089 6513144 ~ 6554450 (+)
G2304 NA other downstream 2904011 8560066 ~ 8560478 (+)
G2358 LOC108432992,LOC101077340,LOC100691215,LOC101465674 other downstream 3076668 8732723 ~ 8734952 (+)

Expression


Co-expression Network