trnag-ucc_5


Basic Information

Item Value
gene id trnag-ucc_5
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035897.1
NCBI id CM008300.1
chromosome length 26953843
location 22590501 ~ 22590572 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>trnag-ucc_5
GCGTTGGTGGTATAGTGGTGAGCATAGCTGCCTTCCAAGCAGTTGacccgggttcgattcccggccaaCGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnag-ucc_5 True 72 tRNA 0.58 1 22590501 22590572

Neighbor

gene id symbol gene type direction distance location
trnag-ucc_4 NA coding upstream 970 22589460 ~ 22589531 (+)
aasdhppt aasdhppt coding upstream 75044 22506867 ~ 22515457 (+)
dync2h1 dync2h1,LOC108413322,LOC107566891 coding upstream 261308 22258158 ~ 22329193 (+)
LOC103022049 NA coding upstream 400193 22165399 ~ 22190308 (+)
il1rap NA coding upstream 428306 22138587 ~ 22162195 (+)
trnag-ucc_6 NA coding downstream 847 22591419 ~ 22591490 (+)
lamtor1 lamtor1,LOC106581407 coding downstream 4429 22595001 ~ 22604561 (+)
numa1 NA coding downstream 17251 22607823 ~ 22628028 (+)
LOC103041960 NA coding downstream 38489 22629061 ~ 22641854 (+)
nox4 nox4 coding downstream 81483 22672055 ~ 22692671 (+)
G5455 NA non-coding upstream 244719 22344076 ~ 22345782 (+)
G5416 NA non-coding upstream 375450 22214411 ~ 22215051 (+)
G5379 NA non-coding upstream 393016 22169112 ~ 22197485 (+)
G5382 NA non-coding upstream 396618 22192933 ~ 22193883 (+)
G5371 NA non-coding upstream 461207 22126998 ~ 22129294 (+)
G5595 NA non-coding downstream 116541 22707113 ~ 22707769 (+)
G5619 NA non-coding downstream 232299 22822871 ~ 22824066 (+)
G5628 NA non-coding downstream 314566 22905138 ~ 22905655 (+)
G5640 rab34a,LOC103022556,LOC108443499,LOC107758713,LOC107672399,LOC107657101 non-coding downstream 359255 22949827 ~ 22951675 (+)
G5642 LOC108443500 non-coding downstream 365488 22956060 ~ 22958499 (+)
LOC103043812 gria4a,gria4,LOC107725765,LOC107670112,LOC107689577,LOC107566895,LOC107560842,LOC107756206,LOC107756230 other upstream 65755 22407556 ~ 22524746 (+)
LOC103022859 fgf12,fgf12b,fgf12a,LOC108411839,LOC108278337,LOC107689585,LOC108436038 other upstream 435575 22056522 ~ 22154926 (+)
G5026 NA other upstream 1591301 20983707 ~ 20999200 (+)
LOC103037169 NA other upstream 2007627 20558523 ~ 20582874 (+)
LOC107197594 NA other upstream 2038866 20549191 ~ 20551635 (+)
LOC103041654 chordc1,LOC108412466 other downstream 52038 22642610 ~ 22673984 (+)
LOC103045948 grm5b,LOC108411478,LOC107670133,LOC107737424,LOC107731813,LOC107669866 other downstream 118340 22708912 ~ 22758213 (+)
G5620 LOC107694033,LOC107752375,LOC107592755,LOC105030986 other downstream 312194 22902766 ~ 22923081 (+)
G5646 NA other downstream 373488 22964060 ~ 22964924 (+)
LOC103024639 NA other downstream 490819 23081391 ~ 23156366 (+)

Expression


Co-expression Network