G96061


Basic Information

Item Value
gene id G96061
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035907.1
NCBI id CM008310.1
chromosome length 11650534
location 578494 ~ 578831 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU129412
tcagcattacagatatataaaaggaacaaaaattaatagatatatattagaaaagagtaaaagtacatcaacgAATACAATCTCGATAGATCAACACATTcgcaacccagagagagagagaaagagagagaaagagagagagagagagagagagagagagagaaagaaagagaaagaaactaaagccagtcgagggacagagagaactcctcagacttcatccaagcagttatacatttatGCAAATGACGTGATTGGACAGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU129412 True 264 lncRNA 0.37 2 578494 578831

Neighbor

gene id symbol gene type direction distance location
LOC103038500 c1ql1,LOC108429188,LOC107677187,LOC107667184,LOC107554477,LOC107599703,LOC107717612 coding upstream 83111 481159 ~ 495383 (+)
LOC103039326 LOC108429160 coding upstream 118312 449751 ~ 460182 (+)
cep162 cep162 coding upstream 353699 163671 ~ 224795 (+)
crhr1 crhr1,LOC108429163,LOC108273210,LOC107662410,LOC105890724,LOC108413653 coding downstream 18155 596986 ~ 636430 (+)
LOC103035972 LOC108269775,LOC100333227,LOC107747872,LOC100704930 coding downstream 73793 652624 ~ 682305 (+)
LOC103035662 tnnt1,LOC108429193 coding downstream 107019 685850 ~ 698734 (+)
LOC103035039 NA coding downstream 136411 715242 ~ 731435 (+)
tsr3 tsr3,LOC107717598,LOC107667183,LOC107747895,LOC107556684,LOC107677200 coding downstream 165554 744385 ~ 750365 (+)
LOC111193406 NA non-coding upstream 45425 531857 ~ 533069 (+)
G96021 NA non-coding upstream 47529 530684 ~ 530965 (+)
G96020 NA non-coding upstream 50746 527430 ~ 527748 (+)
G96019 NA non-coding upstream 51733 526475 ~ 526761 (+)
G96018 NA non-coding upstream 52210 525968 ~ 526284 (+)
G96073 NA non-coding downstream 7074 585905 ~ 586112 (+)
G96116 gnptg non-coding downstream 157910 736741 ~ 743739 (+)
G96124 NA non-coding downstream 230490 809321 ~ 809530 (+)
G96132 NA non-coding downstream 256651 835482 ~ 836102 (+)
G96281 NA non-coding downstream 762730 1341561 ~ 1391532 (+)
LOC103040575 ube2i,LOC107677193 other downstream 220393 799224 ~ 808574 (+)
ddc ddc,LOC107551213,LOC107601670,LOC107746968,LOC107751878 other downstream 2810220 3389051 ~ 3438726 (+)
LOC111193421 mboat1 other downstream 3286159 3864990 ~ 3898919 (+)
ndufaf6 ndufaf6 other downstream 4386639 4965470 ~ 4980947 (+)
c11h1orf43 aqp10a,cunh1orf43,c1h1orf43,LOC108429989,LOC108265981,LOC107714675,LOC107673770,LOC107596410,LOC107723578,LOC107582062,LOC107714677,LOC107677017 other downstream 5228737 5807568 ~ 5850530 (+)

Expression


Co-expression Network