Item | Value |
---|---|
gene id | G96204 |
gene name | pdpk1b,pdpk1,LOC108429196,LOC108264442,LOC107747865,LOC107667172 |
gene type | non-coding |
species | mexican tetra (Astyanax mexicanus) |
category of species | ornamental fish |
Item | Value |
---|---|
chromosome id | NC_035907.1 |
NCBI id | CM008310.1 |
chromosome length | 11650534 |
location | 753008 ~ 760508 (-) |
genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
symbol | description |
---|---|
pdpk1b | Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in intracellular signal transduction and peptidyl-serine phosphorylation. Predicted to act upstream of or within protein phosphorylation. Human ortholog(s) of this gene implicated in prostate cancer. Orthologous to several human genes including PDPK1 (3-phosphoinositide dependent protein kinase 1). |
pdpk1 | Enables 3-phosphoinositide-dependent protein kinase activity; phospholipase activator activity; and phospholipase binding activity. Involved in several processes, including cell surface receptor signaling pathway; regulation of protein kinase activity; and regulation of signal transduction. Acts upstream of or within intracellular signal transduction. Located in cell projection; cytosol; and plasma membrane. Implicated in prostate cancer. Biomarker of lung non-small cell carcinoma. |
description |
---|
PREDICTED: 3-phosphoinositide-dependent protein kinase 1-like |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU129600 | True | 842 | lncRNA | 0.49 | 4 | 753008 | 760508 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
gnptg | gnptg | coding | downstream | 9278 | 736736 ~ 743730 (-) |
dnaaf3 | NA | coding | downstream | 41897 | 698723 ~ 711111 (-) |
LOC111193396 | NA | coding | downstream | 176452 | 575511 ~ 576556 (-) |
LOC103037419 | LOC108429189,LOC108272415 | coding | downstream | 179718 | 551438 ~ 573290 (-) |
dcakd | dcakd,LOC107667188,LOC107747896,LOC107717668,LOC107554516 | coding | downstream | 207989 | 536446 ~ 545019 (-) |
il4r | NA | coding | upstream | 51600 | 812108 ~ 827863 (-) |
LOC103030489 | kcnc3b,LOC103030489,LOC108429201,LOC107667167,LOC103358372 | coding | upstream | 118386 | 878894 ~ 969646 (-) |
cluap1 | cluap1,LOC107667210,LOC107718203,LOC107747891 | coding | upstream | 449000 | 1209508 ~ 1223065 (-) |
LOC103026561 | LOC103026561,LOC108429165,LOC107554213,LOC107747860,LOC107667231,LOC107677303,LOC107556681,LOC107717783 | coding | upstream | 549035 | 1309543 ~ 1311140 (-) |
LOC103027648 | LOC108429212 | coding | upstream | 662271 | 1422779 ~ 1439828 (-) |
G96171 | NA | non-coding | downstream | 29530 | 637382 ~ 723478 (-) |
G96081 | NA | non-coding | downstream | 173849 | 578492 ~ 579159 (-) |
G96058 | NA | non-coding | downstream | 225247 | 527434 ~ 527761 (-) |
G96057 | NA | non-coding | downstream | 226247 | 526407 ~ 526761 (-) |
G96056 | NA | non-coding | downstream | 226725 | 525949 ~ 526283 (-) |
G96202 | pdpk1b,LOC108429196,LOC108264442,LOC107677174,LOC107718133,LOC107554309 | non-coding | upstream | 9578 | 770086 ~ 776473 (-) |
G96213 | NA | non-coding | upstream | 75020 | 835528 ~ 836117 (-) |
G96257 | wdr90,LOC107747862,LOC107554221 | non-coding | upstream | 463656 | 1224164 ~ 1226850 (-) |
G96355 | NA | non-coding | upstream | 517235 | 1277743 ~ 1281993 (-) |
G96358 | rhot2 | non-coding | upstream | 527535 | 1288043 ~ 1291525 (-) |
LOC103043490 | NA | other | downstream | 487414 | 252340 ~ 265594 (-) |
carmil1 | carmil1 | other | upstream | 821499 | 1582007 ~ 1778100 (-) |
LOC103031019 | NA | other | upstream | 1051193 | 1811701 ~ 1815034 (-) |
mboat1 | mboat1 | other | upstream | 3118188 | 3878696 ~ 3899248 (-) |
LOC107197182 | NA | other | upstream | 3389495 | 4150003 ~ 4178426 (-) |
dek | dek | other | upstream | 3683721 | 4444229 ~ 4453002 (-) |