G96282


Basic Information

Item Value
gene id G96282
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035907.1
NCBI id CM008310.1
chromosome length 11650534
location 1344037 ~ 1344448 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU129704
GAGTTATCAGCTCATATTcagagcatcttttgctggagtgtagaggaaacagctggtctgaagttcatgctcaggtcgaggaggagaaaaaaggccaaGCGGTTTGCTTAGCCGCACAGCTGCACCAGGAgatgtgtaaaagcaaaaaaacgcgtgaattctgatttgactgttccaacataaaagtgactcaaatctgatttgaaaaaatctgatttggcacgttcacacagccatgaaaaaatcagatctgagccacattaagcaaaaaatcagatttgagtcacttcagcctggtaatgtgaacgttgCCTAGAAATAGGAAACAGGCCatcagctctgtgtgtgtgtgtgtgtgtgagacagagacaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU129704 True 373 lncRNA 0.43 2 1344037 1344448

Neighbor

gene id symbol gene type direction distance location
rhot2 rhot2,LOC107677299,LOC107556678 coding upstream 41258 1277784 ~ 1302779 (+)
wdr90 wdr90,LOC107677127 coding upstream 72535 1224176 ~ 1271502 (+)
nlrc3 nlrc3 coding upstream 134640 1020134 ~ 1209397 (+)
LOC111193408 NA coding upstream 395452 943873 ~ 948585 (+)
cog7 cog7,LOC107717425,LOC107747870 coding upstream 479449 840868 ~ 864588 (+)
wdr24 wdr24,LOC107747855,LOC107717799,LOC107667227 coding downstream 95381 1439829 ~ 1455488 (+)
LOC103029750 h3f3b,H3F3A,LOC105909691,LOC107388308,LOC101073377,LOC103395674,LOC101167724 coding downstream 138238 1482686 ~ 1486444 (+)
c11h7orf50 cunh7orf50 coding downstream 153663 1498111 ~ 1515737 (+)
colec10 NA coding downstream 543153 1887601 ~ 1905908 (+)
mal2 mal2,LOC107683116,LOC107757438 coding downstream 566657 1911105 ~ 1924151 (+)
G96132 NA non-coding upstream 507935 835482 ~ 836102 (+)
G96124 NA non-coding upstream 534507 809321 ~ 809530 (+)
G96116 gnptg non-coding upstream 600298 736741 ~ 743739 (+)
G96073 NA non-coding upstream 757925 585905 ~ 586112 (+)
G96061 NA non-coding upstream 765206 578494 ~ 578831 (+)
G96286 NA non-coding downstream 20336 1364784 ~ 1456887 (+)
G96273 NA non-coding downstream 37977 1382425 ~ 1421881 (+)
G96289 NA non-coding downstream 47560 1392008 ~ 1392358 (+)
G96291 NA non-coding downstream 81810 1426258 ~ 1429217 (+)
G96460 NA non-coding downstream 465941 1810389 ~ 1857895 (+)
LOC103040575 ube2i,LOC107677193 other upstream 535463 799224 ~ 808574 (+)
ddc ddc,LOC107551213,LOC107601670,LOC107746968,LOC107751878 other downstream 2044603 3389051 ~ 3438726 (+)
LOC111193421 mboat1 other downstream 2520542 3864990 ~ 3898919 (+)
ndufaf6 ndufaf6 other downstream 3621022 4965470 ~ 4980947 (+)
c11h1orf43 aqp10a,cunh1orf43,c1h1orf43,LOC108429989,LOC108265981,LOC107714675,LOC107673770,LOC107596410,LOC107723578,LOC107582062,LOC107714677,LOC107677017 other downstream 4463120 5807568 ~ 5850530 (+)
efna3 efna3b,LOC108429914,LOC107699557,LOC108254910,LOC107723569,LOC107677021 other downstream 4935874 6280322 ~ 6382717 (+)

Expression


Co-expression Network