G96582


Basic Information

Item Value
gene id G96582
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035907.1
NCBI id CM008310.1
chromosome length 11650534
location 2262039 ~ 2265095 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU130097
TAACCATTTTTCTGCTGATATTTTGTatcagaaataaacaaacaaacaaaaaaacatgccatCAGCATATGGCTATTCAGGAAGAGAAAGACGAGAGGATTGAAAGCTCATAGAACTTTGGGCTGGAGTTTGGACAGCGCCAGCTTTCTGtagaAAGCCACTCATTTAACTAGACCCAGGATGGAGAGATAACAGAGTTAAAGGGAGAAGATGGGGCAGTGGAGTGTTGCAAAAACTTGTAATGACACGTAAGAGAGATTCAGGGAATTTATAGGATATGGGATTAGAAAGGGGAGGtgcttattgttttattttaaaacctttttttataaaaaaaatgaattgaaaataaaaaagtttttataaaaagtCAACTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU130097 True 378 lncRNA 0.35 2 2262039 2265095

Neighbor

gene id symbol gene type direction distance location
LOC103036307 LOC106588695 coding upstream 94348 2151917 ~ 2167691 (+)
ice1 NA coding upstream 113301 2126283 ~ 2148738 (+)
prpf3 prpf3 coding upstream 140329 2110877 ~ 2121710 (+)
LOC103032920 NA coding upstream 176641 2074608 ~ 2085398 (+)
nov NA coding upstream 306973 1950534 ~ 1955066 (+)
LOC103037869 triob,LOC108429234,LOC107746974 coding downstream 471034 2736129 ~ 3006374 (+)
cobl NA coding downstream 882274 3147369 ~ 3272603 (+)
grb10 grb10,LOC103031323,LOC107551212,LOC107751877,LOC107746967 coding downstream 1018932 3284027 ~ 3372686 (+)
LOC103035455 LOC103035455,LOC108429251 coding downstream 1388705 3653800 ~ 3741264 (+)
LOC103037205 tmem65,LOC108429253,LOC108271490,LOC106922370,LOC103135153,LOC106953768 coding downstream 1494850 3759945 ~ 3859872 (+)
LOC111193411 NA non-coding upstream 34627 2224582 ~ 2227412 (+)
G96541 NA non-coding upstream 186085 2075386 ~ 2075954 (+)
G96520 taf2 non-coding upstream 247752 2011391 ~ 2014287 (+)
G96517 taf2,LOC106594256 non-coding upstream 258428 1997871 ~ 2003611 (+)
G96460 NA non-coding upstream 404144 1810389 ~ 1857895 (+)
G96601 NA non-coding downstream 188657 2453752 ~ 2454050 (+)
G96604 NA non-coding downstream 230274 2495369 ~ 2495929 (+)
G96609 NA non-coding downstream 236062 2501157 ~ 2503293 (+)
G96614 NA non-coding downstream 253077 2518172 ~ 2586270 (+)
G96651 NA non-coding downstream 656374 2921469 ~ 2922174 (+)
LOC103040575 ube2i,LOC107677193 other upstream 1453465 799224 ~ 808574 (+)
ddc ddc,LOC107551213,LOC107601670,LOC107746968,LOC107751878 other downstream 1123956 3389051 ~ 3438726 (+)
LOC111193421 mboat1 other downstream 1599895 3864990 ~ 3898919 (+)
ndufaf6 ndufaf6 other downstream 2700375 4965470 ~ 4980947 (+)
c11h1orf43 aqp10a,cunh1orf43,c1h1orf43,LOC108429989,LOC108265981,LOC107714675,LOC107673770,LOC107596410,LOC107723578,LOC107582062,LOC107714677,LOC107677017 other downstream 3542473 5807568 ~ 5850530 (+)
efna3 efna3b,LOC108429914,LOC107699557,LOC108254910,LOC107723569,LOC107677021 other downstream 4015227 6280322 ~ 6382717 (+)

Expression


Co-expression Network