G96761


Basic Information

Item Value
gene id G96761
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035907.1
NCBI id CM008310.1
chromosome length 11650534
location 3122855 ~ 3123407 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU130368
TGGACGGATATATCTTCGAGCACTGAGTGACATTGTTATCGAAGGTCATGCCGGCAAAAATGGCCTCTGGAAGCGCAGCACAGAAGGAGATAATCCAGATCACAAGACTCACAGCTGCTCCGTAGCGCAGTGTCCTCGCCCCCATGGTCGACACCGCGTGAACGATGGCCAAATAGCGGTCAACGCTCATCAGCGTCACGAAGAGGATACCGCTGTAGAAGCCCAAGTTGTAGGCGCCCGCCATGGCCTTGCAGACAGCATGAGCTCCAAAGTGATAACCCTGGTTGTACAGGGCCCACCAAGGCAGCGACAGGACGATCAGCAGGTCAGACAGCGCCAGGTTCAGCAAGCACACGTCCGTCATGGTCTTCAGGCGCATCACCTTCAGCAGAACCCACAGGACCATGCTGTTGCCTAGCAGACCCAGGACAAATACCAGATAGAAGATGACGGTCATGACGGCCGGGTTCAGGAGAGATACGTTGGTGTCGCATGGTTGTGTGTCATTGAGGTAATCATAATAATCAGTGATGGTGGTATCCATTGTGTTCAT

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU130368 True 553 lncRNA 0.54 1 3122855 3123407

Neighbor

gene id symbol gene type direction distance location
LOC103037869 triob,LOC108429234,LOC107746974 coding upstream 116481 2736129 ~ 3006374 (+)
LOC103036916 adcy2a,LOC108429235,LOC108272199,LOC103367001 coding upstream 627787 2242170 ~ 2495068 (+)
LOC103036307 LOC106588695 coding upstream 955164 2151917 ~ 2167691 (+)
ice1 NA coding upstream 974117 2126283 ~ 2148738 (+)
prpf3 prpf3 coding upstream 1001145 2110877 ~ 2121710 (+)
cobl NA coding downstream 23962 3147369 ~ 3272603 (+)
grb10 grb10,LOC103031323,LOC107551212,LOC107751877,LOC107746967 coding downstream 160620 3284027 ~ 3372686 (+)
LOC103035455 LOC103035455,LOC108429251 coding downstream 530393 3653800 ~ 3741264 (+)
LOC103037205 tmem65,LOC108429253,LOC108271490,LOC106922370,LOC103135153,LOC106953768 coding downstream 636538 3759945 ~ 3859872 (+)
e2f3 e2f3,LOC108429255 coding downstream 778282 3901689 ~ 3915719 (+)
G96663 NA non-coding upstream 14724 3107781 ~ 3108131 (+)
G96651 NA non-coding upstream 200681 2921469 ~ 2922174 (+)
G96614 NA non-coding upstream 536585 2518172 ~ 2586270 (+)
G96609 NA non-coding upstream 619562 2501157 ~ 2503293 (+)
G96604 NA non-coding upstream 626926 2495369 ~ 2495929 (+)
G96861 NA non-coding downstream 379431 3502838 ~ 3507691 (+)
G96888 NA non-coding downstream 410139 3533546 ~ 3582765 (+)
G96912 NA non-coding downstream 590111 3713518 ~ 3716401 (+)
G96915 NA non-coding downstream 604525 3727932 ~ 3728573 (+)
LOC111193420 NA non-coding downstream 628085 3751492 ~ 3752697 (+)
LOC103040575 ube2i,LOC107677193 other upstream 2314281 799224 ~ 808574 (+)
ddc ddc,LOC107551213,LOC107601670,LOC107746968,LOC107751878 other downstream 265644 3389051 ~ 3438726 (+)
LOC111193421 mboat1 other downstream 741583 3864990 ~ 3898919 (+)
ndufaf6 ndufaf6 other downstream 1842063 4965470 ~ 4980947 (+)
c11h1orf43 aqp10a,cunh1orf43,c1h1orf43,LOC108429989,LOC108265981,LOC107714675,LOC107673770,LOC107596410,LOC107723578,LOC107582062,LOC107714677,LOC107677017 other downstream 2684161 5807568 ~ 5850530 (+)
efna3 efna3b,LOC108429914,LOC107699557,LOC108254910,LOC107723569,LOC107677021 other downstream 3156915 6280322 ~ 6382717 (+)

Expression


Co-expression Network