G96915


Basic Information

Item Value
gene id G96915
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035907.1
NCBI id CM008310.1
chromosome length 11650534
location 3727932 ~ 3728573 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU130594
ttttagcttgtttttgtGGGCTGAATGGAATTCCCTTCATGTATGTACAGTAGACTTGCTATTATCATTCTGTGTAAATATGCTGCTTTTGACGTATCATCTTTCAGTAGTAGTTTCGAGGTTGTCGGAGTGGAAGAACTGGATAGTCTGTGACTAATCAGTCCCTTTACATGGTATTTTGACAACCTGTCATACTCCAGACAAGCTTGTTGATGGTTCAGGAGTAGATAAGCCATGCCTATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU130594 True 243 lncRNA 0.40 2 3727932 3728573

Neighbor

gene id symbol gene type direction distance location
grb10 grb10,LOC103031323,LOC107551212,LOC107751877,LOC107746967 coding upstream 355246 3284027 ~ 3372686 (+)
cobl NA coding upstream 455329 3147369 ~ 3272603 (+)
LOC103037869 triob,LOC108429234,LOC107746974 coding upstream 721558 2736129 ~ 3006374 (+)
LOC103036916 adcy2a,LOC108429235,LOC108272199,LOC103367001 coding upstream 1232864 2242170 ~ 2495068 (+)
LOC103036307 LOC106588695 coding upstream 1560241 2151917 ~ 2167691 (+)
LOC103037205 tmem65,LOC108429253,LOC108271490,LOC106922370,LOC103135153,LOC106953768 coding downstream 31372 3759945 ~ 3859872 (+)
e2f3 e2f3,LOC108429255 coding downstream 173116 3901689 ~ 3915719 (+)
LOC103038805 NA coding downstream 195088 3923661 ~ 3925572 (+)
tmem158 tmem158 coding downstream 433301 4161874 ~ 4164337 (+)
LOC103035111 NA coding downstream 441873 4170446 ~ 4194866 (+)
G96912 NA non-coding upstream 11531 3713518 ~ 3716401 (+)
G96888 NA non-coding upstream 145167 3533546 ~ 3582765 (+)
G96861 NA non-coding upstream 220241 3502838 ~ 3507691 (+)
G96761 NA non-coding upstream 604525 3122855 ~ 3123407 (+)
G96663 NA non-coding upstream 619801 3107781 ~ 3108131 (+)
LOC111193420 NA non-coding downstream 22919 3751492 ~ 3752697 (+)
LOC111193419 NA non-coding downstream 24599 3753172 ~ 3754770 (+)
G97000 NA non-coding downstream 204238 3932811 ~ 4195776 (+)
G97029 NA non-coding downstream 367561 4096134 ~ 4165899 (+)
G97035 LOC103034794,LOC108437355,LOC104937918 non-coding downstream 467375 4195948 ~ 4197937 (+)
ddc ddc,LOC107551213,LOC107601670,LOC107746968,LOC107751878 other upstream 289206 3389051 ~ 3438726 (+)
LOC103040575 ube2i,LOC107677193 other upstream 2919358 799224 ~ 808574 (+)
LOC111193421 mboat1 other downstream 136417 3864990 ~ 3898919 (+)
ndufaf6 ndufaf6 other downstream 1236897 4965470 ~ 4980947 (+)
c11h1orf43 aqp10a,cunh1orf43,c1h1orf43,LOC108429989,LOC108265981,LOC107714675,LOC107673770,LOC107596410,LOC107723578,LOC107582062,LOC107714677,LOC107677017 other downstream 2078995 5807568 ~ 5850530 (+)
efna3 efna3b,LOC108429914,LOC107699557,LOC108254910,LOC107723569,LOC107677021 other downstream 2551749 6280322 ~ 6382717 (+)
G97678 s10a1,LOC108429935,LOC106570100,LOC105901452,LOC105027143,LOC108437929,LOC106588175 other downstream 2803943 6532516 ~ 6565003 (+)

Expression


Co-expression Network