XLOC_000754 (umod)


Basic Information

Item Value
gene id XLOC_000754
gene name umod
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 55600504 ~ 55606573 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00001244
gTTAATCTGGCTGACCCCTGCTACAACTACACTGTGCTGAATGACTCTTGGAGATCCgtcaataatacaaataacaccAACATGTGTGACCAGTCAGTCTCCTGGAGCGGCTGGTATCGGCTCTTCATTAATGGTCTGAGTGCTCATATCCCAGACACATGTGTTGCAGTGGCTAGATGTGGCACTTCTTTCCCACTGTGGATTCGTGGTGGACACCCAACAGTAGAGGATGGAGTCGTCACTCGAGATGTCTGTGCTAACTGGGATAATTACTGCTGCTTTATCGGCTCTATTCCTACTCGAGTCAAAGCCTGTCCAGGAAACTATTACGTCTATGAGCTGCGCAGTCCAATTGACTGTAGTTTAGCCTACTGTGCAGATGTTGGCAGTGTTATCATCAGCTCTACAGCTGCCACACCAGTGATCATCACACCTGATCCCTGTTTCAACTATACTCTGTTGGATGATTCATGGAGAGCCAACAGCAGTCAGCCATCAAAATCAGTCTACATGTGTGACCGGTCAGTCTCCTGGAGCGGCTGGTATCGGCTCTTAATTAACGGTCTGAACGCTGAGATCCCAGACACATGTGTTGAGAAGTTTAGTTGTGGCACTCATGCTCCACTGTGGATTCGTGGTGGACACCCAACAGTAGAGGATGGAGTCGTCACTCGAGATGTCTGCGGTCACTGGGATAATTACTGCTGCTATTACGGCTCTTTTCCTATTCGAGTCAAAGCCTGTCCAGGAAATTATTACGTCTATGAGCTGCTTAAACCAACTACATGCAATTTGGCCTACTGTGCAGTCGTTACTAACATCACCAACAGCAGTACAACAGCGGCACCACAGACAAGTTCATCAGCTGTTACAAACATCACCAACACTACAACAGTGGCACCGCAGACAACTTTACCAGCTGTAACTGACATCACCAACACCACTACAACAGCAGCACCACATACAACTTTACCAGCTATTATTAACATCGCTAACACCACAACAGCAGCACCACAGACAATTTTACCAGCTATTATTAACATCAACAACACCACAACAGAAGCACCACAGACAACTTTACGAGCTGTAACGGACATCACCAACACCACTACAACAATAGCACCACAGACAAGTTTACCAGCTATCACTAACATCACCAACACCACTACAACAGCAGCACCACAGACAACTTTACCAGCTGTCACTAACATCACCAACACTACAACAGCGGCACCAGAGACAACTTTATCAGGTAAT

Function

symbol description
umod Enables IgG binding activity. Involved in heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules; leukocyte cell-cell adhesion; and neutrophil migration. Located in several cellular components, including apical plasma membrane; basolateral plasma membrane; and spindle pole. Is anchored component of membrane. Implicated in familial juvenile hyperuricemic nephropathy.

GO: NA

KEGG:

id description
ko04147 Exosome
ko00537 Glycosylphosphatidylinositol (GPI)-anchored proteins

Ensembl:

ensembl_id ENSDARG00000086117

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00001244 True 1257 mRNA 0.47 11 55600504 55606573

Neighbor

gene id symbol gene type direction distance location
XLOC_000753 adgre19 coding upstream 12838 55583116 ~ 55587666 (+)
XLOC_000741 NA coding upstream 21068 55314474 ~ 55579436 (+)
XLOC_000752 adgre15 coding upstream 26238 55563532 ~ 55574266 (+)
XLOC_000751 adgre16 coding upstream 59927 55535827 ~ 55540577 (+)
XLOC_000750 adgre9 coding upstream 85320 55478653 ~ 55515184 (+)
XLOC_000755 adgre18 coding downstream 1947 55608520 ~ 55617155 (+)
XLOC_000756 adgre7 coding downstream 36625 55643198 ~ 55646413 (+)
XLOC_000757 adgre8 coding downstream 55918 55662491 ~ 55668390 (+)
XLOC_000758 NA coding downstream 72339 55678912 ~ 55679447 (+)
XLOC_000759 adgre6 coding downstream 96547 55703120 ~ 55707336 (+)
XLOC_000745 NA non-coding upstream 123369 55370138 ~ 55477135 (+)
XLOC_000748 NA non-coding upstream 161229 55437572 ~ 55439275 (+)
XLOC_000747 NA non-coding upstream 207472 55392380 ~ 55393032 (+)
XLOC_000746 NA non-coding upstream 215053 55385192 ~ 55385451 (+)
XLOC_000760 NA non-coding downstream 108345 55714918 ~ 55729126 (+)
XLOC_000761 NA non-coding downstream 111005 55717578 ~ 55721415 (+)
XLOC_000768 NA non-coding downstream 810065 56416638 ~ 56556305 (+)
XLOC_000772 NA non-coding downstream 954653 56561226 ~ 56604352 (+)

Expression


Co-expression Network