G97035 (LOC103034794,LOC108437355,LOC104937918)


Basic Information

Item Value
gene id G97035
gene name LOC103034794,LOC108437355,LOC104937918
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035907.1
NCBI id CM008310.1
chromosome length 11650534
location 4195948 ~ 4197937 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU130748
ttttcaataatattctttttttttgaagagGCACCTGTACTTTCCACAGCAAATACTAGGCAATAATTAAAGCTTTTAAGAAACTGCACCTTTCAACaggaaaataaaagataaaagaaacaaaggctgtgactgaaatggctccctacttCCTCATTAGTGTAGCGCTATATAGGAAGACACTATGTAGTTCACTAAGTAGTGGTGAAACACGAGTGAATTTGGACACTACCTCATCATTAACATGCGCCAGCACCGGTCGCATAAACACCGGAAACATCTGAAGGGCTTAACTGTGTTTtaactccataaacacactgaactgagctctaaattaaagttagtgaagctctgaggTGATCATGAAGTCATTTCTCTGCCTGTTATATTTAAACTGTTTAGAAACATAATCCTCACATTAATGAAATATATGTGAAAAACATCTGAAATTAACAGCGTACGCCGGCTCAtaatgttgccagattgggtggtttcaAGCGAAATGTCGAGTTATGTCTGAAATTGACTAGAGGAAACGCTGTGTTTTGACAGGGGGACAAAACTACCAAGTGTTAAGAGTttgtatatttacctcagcagtgttgtaGATAGATAACgctaaccttgcagagacagagcttttagtcctgctgatggaaattcGAATAagcagtgtttgtgttggttaTTATATATgagtatttctttctttcattgctggcaagtttatttttatgtattgtaaTTACTTTTCTTTGGTTCGTGTGTCCTATCATACAATGCACAAAACATATAATACGAAAATGcagatcaaatcaaataaatattttttttttgtaattggtgATATTTAAGATGTAATACTCTTTTTGGGtggttttctctgcattttttcTCTGCAGATTTTAAACACGTTTTatctgaatcccactgtaacaatctggcaaccctgatggCTCACTgtctgctctgtttgtttggctgtctgttgcttagtagaCTCACAATGCATTCTGGGACACATTTAGCTTGCTTAGTAAGCAGCCGTGTTTATTAtgaatcatgatgcattatgggagtttacAGTGTCCTCAAAATCACATTCAAAATTCCTCTTTATGGTTCGGACACTGCGACGCACTCAACAGTGCCCTAAATAGTacatagggagccatttcggtcacagccaaAGAACggttaatatataaaaatgggaAGGTTCTACAGTGATTAAACTGACATGTTGCTTGGTTTAAAGCTTGATTTGCATGTTGTATTGGTTTCAATTGTTATGTAACTGGTATATTACAGTTCTCCATTAACTTTCAGACATTTTCTATTGTTGCTCCAACAAATTTCACCCAAACGAGTCCTCCAATCTGTGTGTAAACTAATAGTGACCTGCTGTGTAACACCCCCAAGTTTGAAGCCTGATCTTTGCTTGTTTGTAAGACTTGAGTAGAGATGCATTAAACAAAGTAGTAAATATTTATCATGCACCAGTACTGATAATACATTCCCTGCATGTTATAAAGGATAAAGGAAACAGTGATACATGGATCGAGCTGCACATCTCAGACGATATTGAACTCGCACACAGAGGCCTTCTCAGCACGGCAGCTCTCATCAAACCACTTCCCGTTGGCAGGGTTAGAGAGGATGGCGCAGTTCTGGCTGCGGCCGCCATCGGGTTGATGGGTCACCGCCGTCTCCCAGTTCTTAAAGCGAACAGTGTTGCCTGACTTGTCCACCCAATCGCCCTCCTTCACCATGTCATTCACGCCGAGCCAGATGTGTTCCTCAGGCCCGATGGTCTGACGTACGTAAGCATAGAGCTGGTCGTTCTCGTCGCTGTTCAGAGGAGTGCTGAGGGTGCCACCTTTCATGATGCAGTCATCGCTAGCCACATGGTAGCTCTTCTTCACTGGGTCTGCCAGAAAACATTTCCCCGGGACCTTGATGCCTTTCAG

Function

NR:

description
tetranectin

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU130748 True 1970 lncRNA 0.41 2 4195948 4197937

Neighbor

gene id symbol gene type direction distance location
LOC103035111 NA coding upstream 1082 4170446 ~ 4194866 (+)
tmem158 tmem158 coding upstream 31611 4161874 ~ 4164337 (+)
LOC103038805 NA coding upstream 270376 3923661 ~ 3925572 (+)
e2f3 e2f3,LOC108429255 coding upstream 280229 3901689 ~ 3915719 (+)
LOC103037205 tmem65,LOC108429253,LOC108271490,LOC106922370,LOC103135153,LOC106953768 coding upstream 336076 3759945 ~ 3859872 (+)
decr1 decr1,LOC107580031,LOC107756153,LOC107704989,LOC107705494 coding downstream 4026 4201963 ~ 4225743 (+)
LOC103036464 kiaa0319 coding downstream 199154 4397091 ~ 4421912 (+)
kcnv1 kcnv1,si:dkey-201i6.2,LOC107666889,LOC107717377,LOC107668317 coding downstream 261615 4459552 ~ 4488435 (+)
LOC103036163 si:dkey-22o22.2,LOC108437325,LOC108272818,LOC107666790,LOC107717379,LOC107713796,LOC107668308,LOC107592533,LOC107600533 coding downstream 458565 4656502 ~ 4884316 (+)
LOC111193422 NA coding downstream 750446 4948383 ~ 4954529 (+)
G97000 NA non-coding upstream 172 3932811 ~ 4195776 (+)
G97029 NA non-coding upstream 30049 4096134 ~ 4165899 (+)
LOC111193419 NA non-coding upstream 441178 3753172 ~ 3754770 (+)
LOC111193420 NA non-coding upstream 443251 3751492 ~ 3752697 (+)
G96915 NA non-coding upstream 467375 3727932 ~ 3728573 (+)
G97038 NA non-coding downstream 28003 4225940 ~ 4287454 (+)
G97042 NA non-coding downstream 44593 4242530 ~ 4256999 (+)
G97048 pnp4b,LOC108437351,LOC108272756,LOC106605471 non-coding downstream 92113 4290050 ~ 4290894 (+)
G97053 NA non-coding downstream 131081 4329018 ~ 4330306 (+)
G97067 NA non-coding downstream 226717 4424654 ~ 4495490 (+)
LOC111193421 mboat1 other upstream 297029 3864990 ~ 3898919 (+)
ddc ddc,LOC107551213,LOC107601670,LOC107746968,LOC107751878 other upstream 757222 3389051 ~ 3438726 (+)
LOC103040575 ube2i,LOC107677193 other upstream 3387374 799224 ~ 808574 (+)
ndufaf6 ndufaf6 other downstream 767533 4965470 ~ 4980947 (+)
c11h1orf43 aqp10a,cunh1orf43,c1h1orf43,LOC108429989,LOC108265981,LOC107714675,LOC107673770,LOC107596410,LOC107723578,LOC107582062,LOC107714677,LOC107677017 other downstream 1609631 5807568 ~ 5850530 (+)
efna3 efna3b,LOC108429914,LOC107699557,LOC108254910,LOC107723569,LOC107677021 other downstream 2082385 6280322 ~ 6382717 (+)
G97678 s10a1,LOC108429935,LOC106570100,LOC105901452,LOC105027143,LOC108437929,LOC106588175 other downstream 2334579 6532516 ~ 6565003 (+)
adar adar,LOC107723500 other downstream 2456413 6654350 ~ 6681691 (+)

Expression


Co-expression Network