G97038


Basic Information

Item Value
gene id G97038
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035907.1
NCBI id CM008310.1
chromosome length 11650534
location 4225940 ~ 4287454 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU130752
tCTTCCAAATCAGTGCCATTTCtctccccaggaaattacatgtttaaatgtgcacacaaaataactttaaaatacattttattattaaccatagtgtcttgtacattgaccttattgcaaaagtaagatatgtaaataaaaaaataataaaaactacttagaacactgaaagaatagcatttgttacctgcccccactctctaactgtaaactttaccatggaatataattattaaaatccttcagagatttttttttctgcaattttTTACTCCAAATcgcatctatgctttaaaaatatatttttcataataaatcaataatatttcatttaaaatacacattttagttgtgtccctgggtttcagtctacaacaggaagttacatcagctggttcttctgaagatcacaGGAAAACCAAagttaagttccctcattatttttttctgtatatctgatcttattgtaactgtgactgaggaggtcagttttaacactctgtgctgttacctaaattaattcttagatattatttgtttattttaaaatacatttaaaaaaaacaaaaaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU130752 True 573 lncRNA 0.28 2 4225940 4287454

Neighbor

gene id symbol gene type direction distance location
decr1 decr1,LOC107580031,LOC107756153,LOC107704989,LOC107705494 coding upstream 197 4201963 ~ 4225743 (+)
LOC103035111 NA coding upstream 31074 4170446 ~ 4194866 (+)
tmem158 tmem158 coding upstream 61603 4161874 ~ 4164337 (+)
LOC103038805 NA coding upstream 300368 3923661 ~ 3925572 (+)
e2f3 e2f3,LOC108429255 coding upstream 310221 3901689 ~ 3915719 (+)
LOC103036464 kiaa0319 coding downstream 109637 4397091 ~ 4421912 (+)
kcnv1 kcnv1,si:dkey-201i6.2,LOC107666889,LOC107717377,LOC107668317 coding downstream 172098 4459552 ~ 4488435 (+)
LOC103036163 si:dkey-22o22.2,LOC108437325,LOC108272818,LOC107666790,LOC107717379,LOC107713796,LOC107668308,LOC107592533,LOC107600533 coding downstream 369048 4656502 ~ 4884316 (+)
LOC111193422 NA coding downstream 660929 4948383 ~ 4954529 (+)
plekhf2 plekhf2,LOC107666819,LOC107600513,LOC107668314 coding downstream 705523 4992977 ~ 5029269 (+)
G97035 LOC103034794,LOC108437355,LOC104937918 non-coding upstream 28003 4195948 ~ 4197937 (+)
G97000 NA non-coding upstream 30164 3932811 ~ 4195776 (+)
G97029 NA non-coding upstream 60041 4096134 ~ 4165899 (+)
LOC111193419 NA non-coding upstream 471170 3753172 ~ 3754770 (+)
LOC111193420 NA non-coding upstream 473243 3751492 ~ 3752697 (+)
G97048 pnp4b,LOC108437351,LOC108272756,LOC106605471 non-coding downstream 2596 4290050 ~ 4290894 (+)
G97053 NA non-coding downstream 41564 4329018 ~ 4330306 (+)
G97067 NA non-coding downstream 137200 4424654 ~ 4495490 (+)
G97074 dek non-coding downstream 156793 4444247 ~ 4453022 (+)
G97080 NA non-coding downstream 218729 4506183 ~ 4559257 (+)
LOC111193421 mboat1 other upstream 327021 3864990 ~ 3898919 (+)
ddc ddc,LOC107551213,LOC107601670,LOC107746968,LOC107751878 other upstream 787214 3389051 ~ 3438726 (+)
LOC103040575 ube2i,LOC107677193 other upstream 3417366 799224 ~ 808574 (+)
ndufaf6 ndufaf6 other downstream 678016 4965470 ~ 4980947 (+)
c11h1orf43 aqp10a,cunh1orf43,c1h1orf43,LOC108429989,LOC108265981,LOC107714675,LOC107673770,LOC107596410,LOC107723578,LOC107582062,LOC107714677,LOC107677017 other downstream 1520114 5807568 ~ 5850530 (+)
efna3 efna3b,LOC108429914,LOC107699557,LOC108254910,LOC107723569,LOC107677021 other downstream 1992868 6280322 ~ 6382717 (+)
G97678 s10a1,LOC108429935,LOC106570100,LOC105901452,LOC105027143,LOC108437929,LOC106588175 other downstream 2245062 6532516 ~ 6565003 (+)
adar adar,LOC107723500 other downstream 2366896 6654350 ~ 6681691 (+)

Expression


Co-expression Network