Item | Value |
---|---|
gene id | LOC107197182 |
gene name | NA |
gene type | misc |
species | mexican tetra (Astyanax mexicanus) |
category of species | ornamental fish |
Item | Value |
---|---|
chromosome id | NC_035907.1 |
NCBI id | CM008310.1 |
chromosome length | 11650534 |
location | 4150003 ~ 4178426 (-) |
genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU130868 | True | 4601 | lncRNA | 0.41 | 3 | 4171818 | 4178426 |
TU130870 | False | 841 | lncRNA | 0.49 | 3 | 4170440 | 4178426 |
XR_001518422.2 | False | 105 | ncRNA | 0.43 | 3 | 4150003 | 4174207 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
lars2 | lars2,LOC107598928 | coding | downstream | 10097 | 4022224 ~ 4139906 (-) |
limd1 | LOC106605519,LOC107688969,LOC107598949 | coding | downstream | 152089 | 3939150 ~ 3997914 (-) |
LOC111193417 | rdh13 | coding | downstream | 559923 | 3583849 ~ 3590080 (-) |
LOC103033958 | decr2,LOC107667207,LOC107677236 | coding | downstream | 567010 | 3570916 ~ 3582993 (-) |
rab11fip3 | rab11fip3,LOC108429222,LOC107556639,LOC107677234,LOC107717866,LOC107554161 | coding | downstream | 581018 | 3506196 ~ 3568985 (-) |
clec3b | LOC103034794,LOC108437355 | coding | upstream | 17547 | 4195973 ~ 4199792 (-) |
calb1 | calb1,LOC107704882,LOC107588486,LOC107700706 | coding | upstream | 50211 | 4228637 ~ 4267641 (-) |
LOC103032754 | NA | coding | upstream | 193505 | 4371931 ~ 4394962 (-) |
aldh5a1 | aldh5a1,LOC107700704,LOC107704994,LOC107755744,LOC107705391,LOC107556105 | coding | upstream | 248125 | 4426551 ~ 4442953 (-) |
LOC103030979 | NA | coding | upstream | 354046 | 4532472 ~ 4534586 (-) |
G96996 | NA | non-coding | downstream | 231647 | 3912009 ~ 3918356 (-) |
G96984 | NA | non-coding | downstream | 285948 | 3858928 ~ 3864055 (-) |
G96983 | NA | non-coding | downstream | 320266 | 3829008 ~ 3829737 (-) |
G96961 | NA | non-coding | downstream | 496337 | 3653462 ~ 3653666 (-) |
G96935 | NA | non-coding | downstream | 625258 | 3444988 ~ 3524745 (-) |
G97143 | NA | non-coding | upstream | 38888 | 4217314 ~ 4226794 (-) |
G97142 | NA | non-coding | upstream | 40862 | 4219288 ~ 4221654 (-) |
G97155 | NA | non-coding | upstream | 151284 | 4329710 ~ 4330114 (-) |
G97161 | NA | non-coding | upstream | 169751 | 4348177 ~ 4348625 (-) |
G97158 | NA | non-coding | upstream | 246228 | 4424654 ~ 4495490 (-) |
mboat1 | mboat1 | other | downstream | 250755 | 3878696 ~ 3899248 (-) |
LOC103031019 | NA | other | downstream | 2334969 | 1811701 ~ 1815034 (-) |
carmil1 | carmil1 | other | downstream | 2371903 | 1582007 ~ 1778100 (-) |
LOC103043490 | NA | other | downstream | 3884409 | 252340 ~ 265594 (-) |
dek | dek | other | upstream | 265803 | 4444229 ~ 4453002 (-) |
LOC103028279 | NA | other | upstream | 1362487 | 5540913 ~ 5573904 (-) |
G97717 | NA | other | upstream | 1400136 | 5578562 ~ 5586666 (-) |
riiad1 | NA | other | upstream | 1412556 | 5590982 ~ 5593496 (-) |
LOC111193431 | si:ch211-105c13.3,LOC108441945,LOC107594941,LOC107673711,LOC107582067,LOC107677027,LOC107735771 | other | upstream | 1780895 | 5959321 ~ 6012784 (-) |