G97639


Basic Information

Item Value
gene id G97639
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035907.1
NCBI id CM008310.1
chromosome length 11650534
location 6154825 ~ 6158920 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU131550
acttgctgtcttggtcacagatgctccagcaagacgtgcaccaacaatttgtcctcttttgaactctggtacgtctcccataatgttgtgtgcattgcaattgtaatatttagagcagaactgtgctcttaccctgctaattgaaccaaccttcacactctgctcttactggtgcaatgtgcaattaatggccaaaaagattggccaccaggctgctccaatttagccatgaaacctaaaat

Function

NR:

description
PREDICTED: selenoprotein O

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU131550 True 242 lncRNA 0.43 2 6154825 6158920

Neighbor

gene id symbol gene type direction distance location
flad1 flad1,LOC100286671 coding upstream 25224 6117809 ~ 6129601 (+)
chrnb2 chrnb2,chrnb2b,LOC107594892,LOC107673697,LOC107714697,LOC107677024,LOC107582065 coding upstream 170583 5946355 ~ 5984242 (+)
she she,LOC107677035,LOC107723582,LOC107714680,LOC107673726,LOC107582163 coding upstream 219964 5922768 ~ 5934861 (+)
LOC103038821 NA coding upstream 619013 5526115 ~ 5535812 (+)
pianp pianp coding upstream 765243 5374848 ~ 5389582 (+)
LOC103021450 efna1b,LOC108429932,LOC107595011,LOC107714705,LOC107699555,LOC108269829,LOC107582071,LOC106598406 coding downstream 297591 6456511 ~ 6483707 (+)
slc50a1 slc50a1,LOC106574309,LOC106606111,LOC107582072 coding downstream 327789 6486709 ~ 6494988 (+)
krtcap2 krtcap2 coding downstream 389835 6548755 ~ 6553281 (+)
LOC111193433 s10a1,LOC108429935,LOC106570100,LOC105901452,LOC105027143 coding downstream 399945 6558865 ~ 6563536 (+)
LOC103022085 NA coding downstream 399957 6558877 ~ 6573750 (+)
G97637 NA non-coding upstream 10943 6141717 ~ 6143882 (+)
G97624 NA non-coding upstream 90024 6063761 ~ 6064801 (+)
G97609 NA non-coding upstream 122813 6024156 ~ 6032012 (+)
G97595 si:ch211-105c13.3,LOC108441945,LOC107594941,LOC107673711,LOC107582067,LOC107677027,LOC107735771 non-coding upstream 142272 5996458 ~ 6012553 (+)
G97604 NA non-coding upstream 148249 6005451 ~ 6006576 (+)
G97672 NA non-coding downstream 303646 6462566 ~ 6464220 (+)
G97674 NA non-coding downstream 349191 6508111 ~ 6520915 (+)
G97882 NA non-coding downstream 595821 6754741 ~ 6756061 (+)
G97883 NA non-coding downstream 597796 6756716 ~ 6757072 (+)
G97884 LOC103044954,LOC107599504,LOC103388254,LOC107589412,LOC101077558,LOC103356523,LOC108429942 non-coding downstream 615358 6774278 ~ 6850763 (+)
c11h1orf43 aqp10a,cunh1orf43,c1h1orf43,LOC108429989,LOC108265981,LOC107714675,LOC107673770,LOC107596410,LOC107723578,LOC107582062,LOC107714677,LOC107677017 other upstream 304295 5807568 ~ 5850530 (+)
ndufaf6 ndufaf6 other upstream 1173878 4965470 ~ 4980947 (+)
LOC111193421 mboat1 other upstream 2255906 3864990 ~ 3898919 (+)
ddc ddc,LOC107551213,LOC107601670,LOC107746968,LOC107751878 other upstream 2716099 3389051 ~ 3438726 (+)
LOC103040575 ube2i,LOC107677193 other upstream 5346251 799224 ~ 808574 (+)
efna3 efna3b,LOC108429914,LOC107699557,LOC108254910,LOC107723569,LOC107677021 other downstream 121402 6280322 ~ 6382717 (+)
G97678 s10a1,LOC108429935,LOC106570100,LOC105901452,LOC105027143,LOC108437929,LOC106588175 other downstream 373596 6532516 ~ 6565003 (+)
adar adar,LOC107723500 other downstream 495430 6654350 ~ 6681691 (+)
apoc1 NA other downstream 903212 7062132 ~ 7066029 (+)
G97926 NA other downstream 909768 7068688 ~ 7070129 (+)

Expression


Co-expression Network