G97940


Basic Information

Item Value
gene id G97940
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035907.1
NCBI id CM008310.1
chromosome length 11650534
location 7239531 ~ 7239765 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU132016
ttattaatttttcaccaagatcttgcagcagcattgatgatggtagagtctgaccactgcacaaagcagctcttctccatccagcacatcccaaagattctcaatgaggttaagatctggactctgtggtgaactctctctcaatccatgtgtgaaaatgataaatgatgatctcatgctccctgaaccctgaactctttcacaattccagccccatgaatcctgacattgttat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU132016 True 235 lncRNA 0.42 1 7239531 7239765

Neighbor

gene id symbol gene type direction distance location
apoc2 NA coding upstream 150113 7084787 ~ 7089418 (+)
LOC103042602 NA coding upstream 158376 7076615 ~ 7081155 (+)
LOC103043120 LOC108429949 coding upstream 188115 7049201 ~ 7051416 (+)
LOC103046789 LOC108429918,LOC108429917,LOC108257096,LOC108280559,LOC108266725,LOC108266736,LOC108266743 coding upstream 202785 7026293 ~ 7036746 (+)
gtpbp10 gtpbp10 coding upstream 287605 6935539 ~ 6951926 (+)
LOC111193393 NA coding downstream 46775 7286540 ~ 7288607 (+)
LOC103045564 LOC107570829 coding downstream 496557 7736322 ~ 7759796 (+)
LOC103045356 ywhabl,LOC107723438,LOC107570839,LOC108265441,LOC107595301,LOC108429958,LOC105896388 coding downstream 608334 7848099 ~ 7866595 (+)
LOC111193438 NA coding downstream 629268 7869033 ~ 7881591 (+)
smg9 smg9,LOC107699520,LOC107595308 coding downstream 652010 7891775 ~ 7900812 (+)
G97938 NA non-coding upstream 20004 7219232 ~ 7219527 (+)
G97930 NA non-coding upstream 113895 7117610 ~ 7125636 (+)
G97929 NA non-coding upstream 114292 7119823 ~ 7125239 (+)
G97901 NA non-coding upstream 354956 6883243 ~ 6884575 (+)
G97884 LOC103044954,LOC107599504,LOC103388254,LOC107589412,LOC101077558,LOC103356523,LOC108429942 non-coding upstream 388768 6774278 ~ 6850763 (+)
G97942 rps19,LOC107657656,LOC100689943 non-coding downstream 20226 7259991 ~ 7280844 (+)
G97947 NA non-coding downstream 53240 7293005 ~ 7293267 (+)
G97948 NA non-coding downstream 55692 7295457 ~ 7298275 (+)
G97955 NA non-coding downstream 176514 7416279 ~ 7419621 (+)
G97965 NA non-coding downstream 252061 7491826 ~ 7492402 (+)
G97931 NA other upstream 108722 7127804 ~ 7130809 (+)
G97926 NA other upstream 169402 7068688 ~ 7070129 (+)
apoc1 NA other upstream 173502 7062132 ~ 7066029 (+)
adar adar,LOC107723500 other upstream 557840 6654350 ~ 6681691 (+)
G97678 s10a1,LOC108429935,LOC106570100,LOC105901452,LOC105027143,LOC108437929,LOC106588175 other upstream 674528 6532516 ~ 6565003 (+)
G98636 NA other downstream 2072641 9312406 ~ 9312803 (+)
G98840 NA other downstream 2756439 9996204 ~ 10002046 (+)
G98845 NA other downstream 2820668 10060433 ~ 10069002 (+)
G98934 grik5,LOC107551699 other downstream 2932788 10172553 ~ 10178459 (+)
G98967 NA other downstream 3254026 10493791 ~ 10498518 (+)

Expression


Co-expression Network