G98117


Basic Information

Item Value
gene id G98117
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035907.1
NCBI id CM008310.1
chromosome length 11650534
location 7791023 ~ 7793327 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU132248
ttttcaatttggtaaaatcaaagaaaatctttaagtgttctcttattttttcagagctataaaTTGCATATGCCACAATTACTCTTAAATTCATAACATATAATCTGACTGTGCATTAAcgtttgcagattttttttacttcaaaatCAATGCAAtgcgatttttttaatgaattctacataacatttaatcaaattaagtattttaaactgacAAAGAACTTTTTTAACAGGCTGTACAGAAGCGCGGCCCTGGGGTGAGTGTTTTCCATCTACTTCAGGAAAACAAGAGGGAAAAACGCAAACCCGCACTGACCTCCCAGATGTTTCCTGAGAGTGATCCTTCACCACAGCCTGCCACATGAGCACAGCATTTCCCagtacacactttttttttttttttacttcaaaatCAATGCAAtgcgatttttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU132248 True 431 lncRNA 0.34 2 7791023 7793327

Neighbor

gene id symbol gene type direction distance location
LOC103045564 LOC107570829 coding upstream 31227 7736322 ~ 7759796 (+)
LOC111193393 NA coding upstream 502416 7286540 ~ 7288607 (+)
apoc2 NA coding upstream 701605 7084787 ~ 7089418 (+)
LOC103042602 NA coding upstream 709868 7076615 ~ 7081155 (+)
LOC103043120 LOC108429949 coding upstream 739607 7049201 ~ 7051416 (+)
LOC103045356 ywhabl,LOC107723438,LOC107570839,LOC108265441,LOC107595301,LOC108429958,LOC105896388 coding downstream 54772 7848099 ~ 7866595 (+)
LOC111193438 NA coding downstream 75706 7869033 ~ 7881591 (+)
smg9 smg9,LOC107699520,LOC107595308 coding downstream 98448 7891775 ~ 7900812 (+)
spaca6 NA coding downstream 267636 8060963 ~ 8074397 (+)
LOC103021308 LOC108429924,LOC108265369,LOC107699476,LOC107714672,LOC107595349 coding downstream 351637 8144964 ~ 8150644 (+)
G97988 NA non-coding upstream 29199 7761185 ~ 7761824 (+)
G97980 NA non-coding upstream 64873 7724230 ~ 7726150 (+)
G97982 NA non-coding upstream 68714 7721279 ~ 7722309 (+)
G97969 NA non-coding upstream 86201 7684613 ~ 7704822 (+)
G97965 NA non-coding upstream 298621 7491826 ~ 7492402 (+)
G98133 NA non-coding downstream 122192 7915519 ~ 7917730 (+)
G98185 NA non-coding downstream 227247 8020574 ~ 8096610 (+)
G98237 LOC108429911,LOC108429926,LOC108265257 non-coding downstream 444263 8237590 ~ 8244865 (+)
G98240 NA non-coding downstream 454528 8247855 ~ 8257070 (+)
G98234 NA non-coding downstream 483743 8277070 ~ 8277823 (+)
G97931 NA other upstream 660214 7127804 ~ 7130809 (+)
G97926 NA other upstream 720894 7068688 ~ 7070129 (+)
apoc1 NA other upstream 724994 7062132 ~ 7066029 (+)
adar adar,LOC107723500 other upstream 1109332 6654350 ~ 6681691 (+)
G97678 s10a1,LOC108429935,LOC106570100,LOC105901452,LOC105027143,LOC108437929,LOC106588175 other upstream 1226020 6532516 ~ 6565003 (+)
G98636 NA other downstream 1519079 9312406 ~ 9312803 (+)
G98840 NA other downstream 2202877 9996204 ~ 10002046 (+)
G98845 NA other downstream 2267106 10060433 ~ 10069002 (+)
G98934 grik5,LOC107551699 other downstream 2379226 10172553 ~ 10178459 (+)
G98967 NA other downstream 2700464 10493791 ~ 10498518 (+)

Expression


Co-expression Network