G98234


Basic Information

Item Value
gene id G98234
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035907.1
NCBI id CM008310.1
chromosome length 11650534
location 8277070 ~ 8277823 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU132416
atgagtttcacattttgaactgaattactgaaataaagtttaaaaacatttaaatgatgttcactttttttttaaagatgtacCTGTATGTAGTGCAAGACTAGGATTAATCCCTCTATGGGAATCTAACCCATAAGGGATTACAAAGCATTTTTAATAGAGATTTTCTATTAAAAGCAACACATGGGAAACTAACCtatagtgttttaaaaatgaatgtggTTTAAATCTAAGCCACGATAATGAAGCTGAATTGCTGACCACAAAGTGGCCAATTTTGAACCTTTGGATGATATAGCTATTATAtcatatcagtatcagtatctaCTGATATCATTACACGTGCgaataatctattttaaaacgttGCTGTAGTGAAATGTAAACTATTGTCAGGTCATTTTTCTGAAGGTCTCTTATTTGCTGTATTGTAAAAGTCAGTCAACAGTCTTAACCAGGTATCTGAGGGCAATCTGAGGGGGCGGGGTTCGTGTTGTAATCAAATTACATTTGATTATGTAATTTGATCAGTTTGATACTAAATCACTTCAAATATTGACTTTAGTATTTAAAATCATATCTGATATCTGATATGTGCACCGCTATGCCCCTCGTGCACATGCATGTAGATTAGCAAGATTAGAATATTAGCATCAACATAAGGGCAGTTTCTTTCTGTATCGCATTATAAATTGCACTTAAAAGCCACCATATCATATTGcacttaaatttaaattgttaattatatGTATCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU132416 True 754 lncRNA 0.32 1 8277070 8277823

Neighbor

gene id symbol gene type direction distance location
LOC103024656 si:ch211-261d7.3,LOC108429975,LOC107714745,LOC107699514 coding upstream 459 8271514 ~ 8276611 (+)
LOC103024130 NA coding upstream 47100 8223512 ~ 8229970 (+)
LOC103023603 NA coding upstream 55224 8216249 ~ 8221846 (+)
LOC103021850 NA coding upstream 63198 8200537 ~ 8213872 (+)
LOC103022775 NA coding upstream 79384 8173555 ~ 8197686 (+)
LOC103025184 LOC108265385 coding downstream 5323 8283146 ~ 8287986 (+)
LOC103044944 NA coding downstream 12907 8290730 ~ 8294447 (+)
LOC103047702 NA coding downstream 17575 8295398 ~ 8311987 (+)
LOC107197655 LOC108429979 coding downstream 36839 8314662 ~ 8320505 (+)
LOC103025484 NA coding downstream 43570 8321393 ~ 8335355 (+)
G98240 NA non-coding upstream 20000 8247855 ~ 8257070 (+)
G98237 LOC108429911,LOC108429926,LOC108265257 non-coding upstream 32205 8237590 ~ 8244865 (+)
G98185 NA non-coding upstream 180460 8020574 ~ 8096610 (+)
G98133 NA non-coding upstream 359340 7915519 ~ 7917730 (+)
G98115 NA non-coding upstream 441866 7781558 ~ 7835204 (+)
G98232 NA non-coding downstream 181 8278004 ~ 8279202 (+)
G98248 NA non-coding downstream 58603 8336426 ~ 8338117 (+)
G98250 NA non-coding downstream 62221 8340044 ~ 8347080 (+)
G98249 NA non-coding downstream 70515 8348338 ~ 8349508 (+)
G98255 NA non-coding downstream 96811 8374634 ~ 8374942 (+)
G97931 NA other upstream 1146261 7127804 ~ 7130809 (+)
G97926 NA other upstream 1206941 7068688 ~ 7070129 (+)
apoc1 NA other upstream 1211041 7062132 ~ 7066029 (+)
adar adar,LOC107723500 other upstream 1595379 6654350 ~ 6681691 (+)
G97678 s10a1,LOC108429935,LOC106570100,LOC105901452,LOC105027143,LOC108437929,LOC106588175 other upstream 1712067 6532516 ~ 6565003 (+)
G98636 NA other downstream 1034583 9312406 ~ 9312803 (+)
G98840 NA other downstream 1718381 9996204 ~ 10002046 (+)
G98845 NA other downstream 1782610 10060433 ~ 10069002 (+)
G98934 grik5,LOC107551699 other downstream 1894730 10172553 ~ 10178459 (+)
G98967 NA other downstream 2215968 10493791 ~ 10498518 (+)

Expression


Co-expression Network