G98436


Basic Information

Item Value
gene id G98436
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035907.1
NCBI id CM008310.1
chromosome length 11650534
location 8750636 ~ 8751485 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU132683
attgagagtgttatggagtgtgtgtgatgaatggAGATTGTGCAGAGTGCATGTGAAGGAGTGTGTGATGAATTGagagtgttatggagtgtgtgtgatgaataGAGATTGTGCAGAGTACATGTGAAGGAGTGTGTGATGAATTGAGAGTGTTATGGAAtgtgtgtgatgaatggAAATTGTGCAGAGTGCATGTGAAGGAGTGTGTGATGAATTGAGAGTGTTatggtgtgtgtgatgaatgGAGATTGTGCAGAGTGCATGTGAAGGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU132683 True 272 lncRNA 0.42 2 8750636 8751485

Neighbor

gene id symbol gene type direction distance location
LOC103030255 dtnbp1,LOC107593648 coding upstream 16746 8723036 ~ 8733890 (+)
LOC103029611 LOC108443721 coding upstream 49659 8688272 ~ 8700977 (+)
LOC111193442 LOC108438282 coding upstream 90368 8648953 ~ 8660268 (+)
derl1 derl1,LOC107714924,LOC107699495,LOC107595682,LOC107736822,LOC107657695 coding upstream 129296 8607571 ~ 8621340 (+)
LOC103028148 tomm40,LOC108438269,LOC107723430,LOC108272680,LOC107699493,LOC107657699 coding upstream 149924 8591025 ~ 8600712 (+)
osbpl8 osbpl8,LOC107555879 coding downstream 6643 8758128 ~ 8795780 (+)
nap1l1 nap1l1,LOC106576514,LOC106609764 coding downstream 47780 8799265 ~ 8815140 (+)
LOC103033147 phlda1 coding downstream 67428 8818913 ~ 8821189 (+)
LOC111193444 NA coding downstream 111255 8862740 ~ 8895597 (+)
krr1 krr1 coding downstream 165091 8916576 ~ 8926508 (+)
G98432 NA non-coding upstream 8188 8741460 ~ 8742448 (+)
G98430 NA non-coding upstream 13685 8736223 ~ 8736951 (+)
G98429 NA non-coding upstream 16396 8733971 ~ 8734240 (+)
G98285 nsmce2 non-coding upstream 143581 8602977 ~ 8607055 (+)
G98287 NA non-coding upstream 169706 8580573 ~ 8580930 (+)
LOC111193443 NA non-coding downstream 111390 8862875 ~ 8893262 (+)
LOC111193445 NA non-coding downstream 134957 8886442 ~ 8887632 (+)
G98457 NA non-coding downstream 142569 8894054 ~ 8894280 (+)
G98460 NA non-coding downstream 155779 8907264 ~ 8907684 (+)
G98462 NA non-coding downstream 158523 8910008 ~ 8910285 (+)
G97931 NA other upstream 1619827 7127804 ~ 7130809 (+)
G97926 NA other upstream 1680507 7068688 ~ 7070129 (+)
apoc1 NA other upstream 1684607 7062132 ~ 7066029 (+)
adar adar,LOC107723500 other upstream 2068945 6654350 ~ 6681691 (+)
G97678 s10a1,LOC108429935,LOC106570100,LOC105901452,LOC105027143,LOC108437929,LOC106588175 other upstream 2185633 6532516 ~ 6565003 (+)
G98636 NA other downstream 560921 9312406 ~ 9312803 (+)
G98840 NA other downstream 1244719 9996204 ~ 10002046 (+)
G98845 NA other downstream 1308948 10060433 ~ 10069002 (+)
G98934 grik5,LOC107551699 other downstream 1421068 10172553 ~ 10178459 (+)
G98967 NA other downstream 1742306 10493791 ~ 10498518 (+)

Expression


Co-expression Network