G98462


Basic Information

Item Value
gene id G98462
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035907.1
NCBI id CM008310.1
chromosome length 11650534
location 8910008 ~ 8910285 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU132723
TCATCTATGCTGGTGTATACTGGCCTGTTCTGCTCTATATTCATCTATGCTGGTGTATACTGGCCTGTTCTGATCTATATTCATCTATGCTGGTGTATACTGGCCTGTTCTGCTCTATAATCATCTATGCTGGTGTATACTGGCCTGTTCTGCTCTATATTCATCTATGCTGGTGTATACTGTCTTGCTCTGCTCTATAATCGTATATGCTGGTATATACTTCACACACTGtaaataccaatgttcttcaccacatgtttaccctattcatttgattg

Function

NR:

description
PREDICTED: protocadherin gamma-A11-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU132723 True 278 lncRNA 0.40 1 8910008 8910285

Neighbor

gene id symbol gene type direction distance location
LOC111193444 NA coding upstream 14411 8862740 ~ 8895597 (+)
LOC103033147 phlda1 coding upstream 88819 8818913 ~ 8821189 (+)
nap1l1 nap1l1,LOC106576514,LOC106609764 coding upstream 94868 8799265 ~ 8815140 (+)
osbpl8 osbpl8,LOC107555879 coding upstream 114228 8758128 ~ 8795780 (+)
LOC103030255 dtnbp1,LOC107593648 coding upstream 176118 8723036 ~ 8733890 (+)
krr1 krr1 coding downstream 6291 8916576 ~ 8926508 (+)
ccdc107 LOC107555866 coding downstream 114102 9024387 ~ 9034301 (+)
LOC103035505 LOC108411721,LOC107658752 coding downstream 137580 9047865 ~ 9080238 (+)
cpsf6 cpsf6,LOC107729149 coding downstream 269500 9179785 ~ 9195720 (+)
LOC103042523 far1,LOC107590516,LOC103366393 coding downstream 304567 9214852 ~ 9268400 (+)
G98460 NA non-coding upstream 2324 8907264 ~ 8907684 (+)
G98457 NA non-coding upstream 15728 8894054 ~ 8894280 (+)
LOC111193443 NA non-coding upstream 16746 8862875 ~ 8893262 (+)
LOC111193445 NA non-coding upstream 22376 8886442 ~ 8887632 (+)
G98436 NA non-coding upstream 158523 8750636 ~ 8751485 (+)
G98483 NA non-coding downstream 53028 8963313 ~ 8965169 (+)
G98494 NA non-coding downstream 152884 9063169 ~ 9153581 (+)
G98496 NA non-coding downstream 173304 9083589 ~ 9086583 (+)
G98497 NA non-coding downstream 173484 9083769 ~ 9084299 (+)
G98498 NA non-coding downstream 176348 9086633 ~ 9096883 (+)
G97931 NA other upstream 1779199 7127804 ~ 7130809 (+)
G97926 NA other upstream 1839879 7068688 ~ 7070129 (+)
apoc1 NA other upstream 1843979 7062132 ~ 7066029 (+)
adar adar,LOC107723500 other upstream 2228317 6654350 ~ 6681691 (+)
G97678 s10a1,LOC108429935,LOC106570100,LOC105901452,LOC105027143,LOC108437929,LOC106588175 other upstream 2345005 6532516 ~ 6565003 (+)
G98636 NA other downstream 402121 9312406 ~ 9312803 (+)
G98840 NA other downstream 1085919 9996204 ~ 10002046 (+)
G98845 NA other downstream 1150148 10060433 ~ 10069002 (+)
G98934 grik5,LOC107551699 other downstream 1262268 10172553 ~ 10178459 (+)
G98967 NA other downstream 1583506 10493791 ~ 10498518 (+)

Expression


Co-expression Network