G99045


Basic Information

Item Value
gene id G99045
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035907.1
NCBI id CM008310.1
chromosome length 11650534
location 10720021 ~ 10720575 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU133530
gatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatactttattaatccccacaggggaaattcatttgtccagcagcaacaactatacaaaaatatacaaaacaaaacacaaaccacAGAGTACACACGTCAACAAGAGGTGTTGTACAGCCTTATGGCAGTAGGAATGAACGACCTTCTGAACCTCTCAGTTTTATGTCGCAGCGAAAGGAGCCTGTTACTGCGGCTGCTTTTTTGAGCAGCCAGAGTCTCATGTAAAGGGTGTCTGTTGTTGTTAAGGATGGTTTGCAACAGACACCTCACCCTCTTCTCCACCAGATCCCCCACATAGTCTACTTTCCCACCCATCACAGAACCACACTTTCTGATCAATTTATCCAGCCTGTTACAGTCTCTCACAGTGATGCTGCTTCCCCAACAAGTCACCCCAAAGAACACAGCACTCGCCACGACGGAATGGTAGAAACTGCGCAGAAACTCACTGCAGATATtaaaggat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU133530 True 555 lncRNA 0.42 1 10720021 10720575

Neighbor

gene id symbol gene type direction distance location
gsk3a gsk3a,gsk3ab,LOC103362704,LOC107724158,LOC108412552 coding upstream 231452 10469175 ~ 10488569 (+)
cic cic coding upstream 268630 10379229 ~ 10451391 (+)
pafah1b3 pafah1b3,LOC108432331,LOC107671211,LOC107755833,LOC108266541 coding upstream 672050 10041913 ~ 10047971 (+)
LOC103040337 NA coding upstream 685753 10027394 ~ 10034268 (+)
LOC103040655 LOC103040655,LOC108266557,LOC108432293 coding upstream 694753 10020638 ~ 10025268 (+)
rabac1 rabac1,LOC107551691,LOC107582040 coding downstream 50923 10771498 ~ 10778123 (+)
LOC103032145 LOC108438260 coding downstream 358960 11079535 ~ 11101099 (+)
zfat zfat coding downstream 391480 11112055 ~ 11127909 (+)
LOC103022365 jarid2a,LOC108443719,LOC108265176,LOC107657689,LOC107593646,LOC107714830,LOC107595576 coding downstream 466574 11187149 ~ 11281470 (+)
dap3 dap3 coding downstream 688883 11409458 ~ 11420340 (+)
G98966 erf non-coding upstream 209590 10503951 ~ 10510431 (+)
G98969 NA non-coding upstream 264855 10453242 ~ 10455166 (+)
G98954 znf574,LOC108412555,LOC107717428,LOC107700188,LOC107551698 non-coding upstream 371428 10346487 ~ 10348593 (+)
G98938 NA non-coding upstream 522110 10183398 ~ 10197911 (+)
G98935 NA non-coding upstream 544160 10174728 ~ 10175861 (+)
G99073 NA non-coding downstream 103900 10824475 ~ 10824863 (+)
G99075 NA non-coding downstream 111591 10832166 ~ 10832404 (+)
G99083 NA non-coding downstream 138633 10859208 ~ 10861238 (+)
G99079 NA non-coding downstream 201455 10922030 ~ 10924394 (+)
LOC111193452 NA non-coding downstream 251361 10971936 ~ 10973112 (+)
G98967 NA other upstream 221503 10493791 ~ 10498518 (+)
G98934 grik5,LOC107551699 other upstream 541562 10172553 ~ 10178459 (+)
G98845 NA other upstream 651019 10060433 ~ 10069002 (+)
G98840 NA other upstream 717975 9996204 ~ 10002046 (+)
G98636 NA other upstream 1407218 9312406 ~ 9312803 (+)
LOC103033199 NA other downstream 279350 10999925 ~ 11027424 (+)
abhd16a abhd16a,LOC107717442,LOC107723554,LOC107582042 other downstream 308247 11028822 ~ 11047690 (+)
LOC111188200 rusc1 other downstream 573517 11294092 ~ 11302885 (+)

Expression


Co-expression Network