tmem158 (tmem158)


Basic Information

Item Value
gene id tmem158
gene name tmem158
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035907.1
NCBI id CM008310.1
chromosome length 11650534
location 4161874 ~ 4164337 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007228887.3
gaagagagagagagagagagttgtgaGCGCAGTGGACAGTTGAGAGACGCGTCTGTGGTGGTTAGTTAGTGCTCGCGGAGCGCGCGAGGGTATCTCTCGCGACCCAGCGCATCCTCCTTTTCAGCTTTTGCGCGCGAGTGACGTACGGCGCACCCTCCACCCTCCCCTCTCCTACCGTCACCCCCCacccttttttctattttttccttttttttcactcCTGCTCGAAACTTTAAATGCCCCGTTCTCCGCGCGCTCCCGCTGCGGGGCCATGCTGAGCCACTCCCGCGCGgctccgctgctgctgctggctctGAGCGCGCTCACCGCCGCCGGACTGGCGCGCGCCTGGAGCGACGACGACCTGCTGCTGCCGCCGGTCAACTCCACCGCGCGCTTCCTGGCCAACCTGGAGGTGGACGTGGCTTACGCGCGAGGCTCCTCGACCTCCTCATCTTCTTCAGcatcttcatcatcttcagcaGCATCATCATCTGGATCTTCTTCCACAGCCGCCGCgacctcctcttcctcttcatcatcttcttctGACTCCTCCGGCGCGTGCAACGTGAGCGTGGAGCGGCTGCCCGCGCGGCTGGTGGCGCGCTGGGACGGCGCGCTGGGCTTCCGCTGCGACGTGCTCGTCTACACGACCAACAGCCACGGCAAGGCGTTCTTCTCCGCCGCCTTCAGCCGCGCCGTCTCGCCCGTCTACATCGAGCACGTGGGGCTCGCGGGGGGCCAGCAGGAGCTGCGGCTGTGCGTGGGCTGCGGAGCCACGGGGCCGGTCAGGCAGCGCCGGAGACCCGGGTCGGTGCGCTTCTGCTGCCTGGACTTCGCCCTGGACGAGCTGAAGGGGGACAGGAGTTGGAGGCTCAACCGCAAGCCCATCGAGTCCACCCTCGTGGCGTGTTTCATGACTCTGGTCATCATCGTGTGGAGCGTGGCCGCCCTCATCTGGCCAGTGCCCATCATCGCGGGCTTCCTGCCCAACGGCATGGAGCAGAGGCGACCCAGATGAACACGTACGCTTTAAGGCTCTTTCACACCGAGTGCCATTTTTCACATCGAGATCGAGTTCACACTTTTTACACTTCTTCCGTCTGTGTTCTGCAAACATAGCTTTAAACACCTTATATATATCTGCTTACTGTCCGGTTTCTGCTCTCTTAAATTTCACTTCTCCTGTAAAAGCTGTAGCCTAAATTTGCTGCTGTCAAGTCATGTCAGAAATACTCTCTTTACAAGAGTGCATATGACATCACAATCTCTTATTTATCAGTGGGAAACTCTGTATTTTCCTTAAGCCCCAACTTTACAAGTTGGGGGTGTgccaaaaaaaacccacaatttTAACAGCAGCTGCAGtctattttcaattttaaaaagaCCAATGGTGGCTTTCCCCAAAATCTTCCTAGCTCAAAGATCATCCTTAGATTCTCGAGTGAGCATCGTACATAGCTTTTTACCATCTGTTCTGTAAACCTGGCTTCAAATGCCctaaatattattttctctgCTCACTGTCCGGTTTCTGCTCTCTTTAATTTCCTTTCTCCTGTAAAAGCTGTAGAAACTTTTCTTTCTATTTACGAGATAAGTGCACATGAACGTGAATGCCATTACAATCTCTTATTTATCAAAAGTGGACTTCACAAGTTGGGGGTGTGCTGATAATAAACGCAAATTAATCAGCAGTTGCAGTCTATTTTTAATGGGTTATTCACCTCCATATATAAAAAGACCAATGGTGGCTTTCCCAAAGTCTTCTTAGCTCAAATACCTTTCATAGATTCTCAAGCAAAAATCATATATAGCTTTTTACCCTCTGTTCTGTAAACATGGCTTAAAATCTCTCAAATTTCCTTTTCTCTGCTCACTGTCTGGATTCTGCTCTCTTTAGTTTATCTTCTActttaaaagctgtaaaaaaggCTCTAACTTTTGCAGCCATTAAGCCACGTCAGAAACACGATTTACAAGATGAGTGCATATGAACATGAATTCCATCACAATTTCTTATTTATCAGTGGAAAACTCTGAATTTTTCTTAAGCCCCAACTTCAGAAGTTGGGGGCGTGCCAATACAAAACGTAAATTTAACAGCAGCTGCAGTCTATTTTTAATGGGTTATCCTTCTCCATATTTGAAAAGATTAATGCTGGCTTTCCCAAATTCTTCCTAGCTCAAATATCATTCTTAGATTCTCGAGCGAGCATCATACATAGCTTTTTACTGTCTGTTCTGTAAACCTGGCTTCAAACTGCCTAAATATCATTTTCTCTGCTTACTGTCCagtttcttctctcttttatttcctTTCTCCTGTAAAAGCTGTAGCCTAATTTTTGCTTTCATCAAGTCATGTCAGAAATACTCTATTTTCGAAATTAGTGCACATGAATATGAAAGTCATCACAATCTCTTATTaacctgtgaaaaaaaaacaacttcacTG

Function

symbol description
tmem158 Predicted to enable peptide binding activity. Predicted to be integral component of membrane.

NR:

description
PREDICTED: transmembrane protein 158

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007228887.3 True 2464 mRNA 0.48 1 4161874 4164337

Neighbor

gene id symbol gene type direction distance location
LOC103038805 NA coding upstream 236302 3923661 ~ 3925572 (+)
e2f3 e2f3,LOC108429255 coding upstream 246155 3901689 ~ 3915719 (+)
LOC103037205 tmem65,LOC108429253,LOC108271490,LOC106922370,LOC103135153,LOC106953768 coding upstream 302002 3759945 ~ 3859872 (+)
LOC103035455 LOC103035455,LOC108429251 coding upstream 420610 3653800 ~ 3741264 (+)
grb10 grb10,LOC103031323,LOC107551212,LOC107751877,LOC107746967 coding upstream 789188 3284027 ~ 3372686 (+)
LOC103035111 NA coding downstream 6109 4170446 ~ 4194866 (+)
decr1 decr1,LOC107580031,LOC107756153,LOC107704989,LOC107705494 coding downstream 37626 4201963 ~ 4225743 (+)
LOC103036464 kiaa0319 coding downstream 232754 4397091 ~ 4421912 (+)
kcnv1 kcnv1,si:dkey-201i6.2,LOC107666889,LOC107717377,LOC107668317 coding downstream 295215 4459552 ~ 4488435 (+)
LOC103036163 si:dkey-22o22.2,LOC108437325,LOC108272818,LOC107666790,LOC107717379,LOC107713796,LOC107668308,LOC107592533,LOC107600533 coding downstream 492165 4656502 ~ 4884316 (+)
LOC111193419 NA non-coding upstream 407104 3753172 ~ 3754770 (+)
LOC111193420 NA non-coding upstream 409177 3751492 ~ 3752697 (+)
G96915 NA non-coding upstream 433301 3727932 ~ 3728573 (+)
G96912 NA non-coding upstream 445473 3713518 ~ 3716401 (+)
G96888 NA non-coding upstream 579109 3533546 ~ 3582765 (+)
G97035 LOC103034794,LOC108437355,LOC104937918 non-coding downstream 31611 4195948 ~ 4197937 (+)
G97038 NA non-coding downstream 61603 4225940 ~ 4287454 (+)
G97042 NA non-coding downstream 78193 4242530 ~ 4256999 (+)
G97048 pnp4b,LOC108437351,LOC108272756,LOC106605471 non-coding downstream 125713 4290050 ~ 4290894 (+)
G97053 NA non-coding downstream 164681 4329018 ~ 4330306 (+)
LOC111193421 mboat1 other upstream 262955 3864990 ~ 3898919 (+)
ddc ddc,LOC107551213,LOC107601670,LOC107746968,LOC107751878 other upstream 723148 3389051 ~ 3438726 (+)
LOC103040575 ube2i,LOC107677193 other upstream 3353300 799224 ~ 808574 (+)
ndufaf6 ndufaf6 other downstream 801133 4965470 ~ 4980947 (+)
c11h1orf43 aqp10a,cunh1orf43,c1h1orf43,LOC108429989,LOC108265981,LOC107714675,LOC107673770,LOC107596410,LOC107723578,LOC107582062,LOC107714677,LOC107677017 other downstream 1643231 5807568 ~ 5850530 (+)
efna3 efna3b,LOC108429914,LOC107699557,LOC108254910,LOC107723569,LOC107677021 other downstream 2115985 6280322 ~ 6382717 (+)
G97678 s10a1,LOC108429935,LOC106570100,LOC105901452,LOC105027143,LOC108437929,LOC106588175 other downstream 2368179 6532516 ~ 6565003 (+)
adar adar,LOC107723500 other downstream 2490013 6654350 ~ 6681691 (+)

Expression


Co-expression Network