dcakd (dcakd,LOC107667188,LOC107747896,LOC107717668,LOC107554516)



Basic Information


Item Value
gene id dcakd
gene name dcakd,LOC107667188,LOC107747896,LOC107717668,LOC107554516
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information


Item Value
chromosome id NC_035907.1
NCBI id CM008310.1
chromosome length 11650534
location 536446 ~ 545019 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence


>XM_007232953.3
GGCAGCAGAGGAGCGCCTGTAATCCCCTCACTGACACACCGGGCTTCTGCGCTGTAGTTCCTCTTCAGCCTCAGTTGTAGGCTTATAAACAGGGTCATGATTAAATATTTGCTCGGGTTTTTATTAGAATCGCCGGGTTTCGCTCATCTCTGAGAGTATAAAGGCTGCAGGTCGtgctgagaggagagagagagagagggggtcgAGCCCGTTTAAAACACACAGCTCAACAACACCGCCGCTTACATGTTTCTGGTAGGGCTGACTGGAGGGATAGCCTCAGGGAAGAGCACCGTGTCCTCTCAGCTGAGGGAGCTGGGCTGCCCTGTCATTGATGCAGATGTTGTGGCCAGAAAAGTGGTGGAGCCACACAGTGCTGCGTACAGGCTGGTGGTGCAGCACTTTGGGCAAGAGGTGTTGCTGGAGAAcggagagatagacagacagaagcTGGGAAACATCATCTTCTCCAGCCCTGAGAAACGCAGGCTGCTCAACTCTATTACACACCCAGAGATCCACAGAGCCATGCTCAAACAGATCCTGCTCTACTTCATCCGAGGTTATCGGTACGTGATTCTGGATGTGCCTCTGTTGTTTGAGACGCGGCGTCTCACGCGCTTCTTAAATCACACAGTTGTCGTCTACTGTGATCCTGCCACACAGCTGGCTCGGCTGATGCACAGGGACGGTTTGAGCCAGGAGGAGGCCGAGCGACGAGTTGCCGCGCAGATGCCCCTGAACGAGAAGCGAGGTTTGGCCAGCCACGTGATCGAAAACTCGGGCTCGCGCGAGGACACGCACCGCCAGGTCCTCAAACTGCACACCAAGCTGGAGGACTCCATGGAGTTCCTGATCGTAAGGGCCATTGCTGTGGCAGCTGTTGCCGGCCTAGGAGGCCTCTTCCTGTACACGGTTAGGCTCCTGGCGTCTTAGCCGCTAGGTGGAACTTTTAATGAGATGTGTGCCTCTAAAATGGAGCCAAGGGCTTCCATGCAGTAacggtggaggagaatatggtGAATGTGggttaaaaatgtgattttgaaATGTAATATGAAATTTGaaggttttaatgtttaaatagatttataatatatattataagaaaACACTAATGACTTTTTAATAGTTCTCACAATGAATTTGACAATCTAAACCTCACAAACAAATGACCTCTGACTTCTTAACACAGTGCACATACTTCACAGTTCTTCAGATCTGTTCCTAGAGGTCCAGCAATTTT
>XM_007232954.3
AGCTAAGGATAAAATCagctgtttacacacatttaaacacattacagagctttaaatgactaaaacacagattaCCGGCTGTATGCGGACTATAGAGCACATATACATGGTGTCTGACTGGATAGCTGCTTAGCTTAGCTCGgtttaaacatataaacacacacagtgtgagtTCAGTGAGGTGGAAAAGACTCAAGAAATGACTTAAACTCAGCCACACTGAGTCATGTTTCTGGTAGGGCTGACTGGAGGGATAGCCTCAGGGAAGAGCACCGTGTCCTCTCAGCTGAGGGAGCTGGGCTGCCCTGTCATTGATGCAGATGTTGTGGCCAGAAAAGTGGTGGAGCCACACAGTGCTGCGTACAGGCTGGTGGTGCAGCACTTTGGGCAAGAGGTGTTGCTGGAGAAcggagagatagacagacagaagcTGGGAAACATCATCTTCTCCAGCCCTGAGAAACGCAGGCTGCTCAACTCTATTACACACCCAGAGATCCACAGAGCCATGCTCAAACAGATCCTGCTCTACTTCATCCGAGGTTATCGGTACGTGATTCTGGATGTGCCTCTGTTGTTTGAGACGCGGCGTCTCACGCGCTTCTTAAATCACACAGTTGTCGTCTACTGTGATCCTGCCACACAGCTGGCTCGGCTGATGCACAGGGACGGTTTGAGCCAGGAGGAGGCCGAGCGACGAGTTGCCGCGCAGATGCCCCTGAACGAGAAGCGAGGTTTGGCCAGCCACGTGATCGAAAACTCGGGCTCGCGCGAGGACACGCACCGCCAGGTCCTCAAACTGCACACCAAGCTGGAGGACTCCATGGAGTTCCTGATCGTAAGGGCCATTGCTGTGGCAGCTGTTGCCGGCCTAGGAGGCCTCTTCCTGTACACGGTTAGGCTCCTGGCGTCTTAGCCGCTAGGTGGAACTTTTAATGAGATGTGTGCCTCTAAAATGGAGCCAAGGGCTTCCATGCAGTAacggtggaggagaatatggtGAATGTGggttaaaaatgtgattttgaaATGTAATATGAAATTTGaaggttttaatgtttaaatagatttataatatatattataagaaaACACTAATGACTTTTTAATAGTTCTCACAATGAATTTGACAATCTAAACCTCACAAACAAATGACCTCTGACTTCTTAACACAGTGCACATACTTCACAGTTCTTCAGATCTGTTCCTAGAGGTCCAGCAATTTT

Function


symbol description
dcakd Predicted to enable dephospho-CoA kinase activity. Predicted to be involved in coenzyme A biosynthetic process. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human DCAKD (dephospho-CoA kinase domain containing).

NR:

description
dephospho-CoA kinase domain-containing protein

GO:

id name namespace
GO:0015937 coenzyme A biosynthetic process biological_process
GO:0016310 phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004140 dephospho-CoA kinase activity molecular_function

KEGG:

id description
K00859 coaE; dephospho-CoA kinase

RNA


RNA id representative length rna type GC content exon number start site end site
XM_007232953.3 True 1246 mRNA 0.50 5 536446 545019
XM_007232954.3 False 1226 mRNA 0.48 5 536446 544765
Loading

Neighbor


gene id symbol gene type direction distance location
LOC103040905 NA coding downstream 160016 366617 ~ 376430 (-)
LOC103042121 LOC108432773 coding downstream 204299 301691 ~ 332147 (-)
mrap2 mrap2 coding downstream 294000 234312 ~ 242446 (-)
LOC103037419 LOC108429189,LOC108272415 coding upstream 6419 551438 ~ 573290 (-)
LOC111193396 NA coding upstream 30492 575511 ~ 576556 (-)
dnaaf3 NA coding upstream 153704 698723 ~ 711111 (-)
gnptg gnptg coding upstream 191717 736736 ~ 743730 (-)
il4r NA coding upstream 267089 812108 ~ 827863 (-)
G96058 NA non-coding downstream 8685 527434 ~ 527761 (-)
G96057 NA non-coding downstream 9685 526407 ~ 526761 (-)
G96056 NA non-coding downstream 10163 525949 ~ 526283 (-)
G96040 NA non-coding downstream 32918 398576 ~ 503528 (-)
G96051 NA non-coding downstream 45451 490376 ~ 490995 (-)
G96081 NA non-coding upstream 33473 578492 ~ 579159 (-)
G96171 NA non-coding upstream 92363 637382 ~ 723478 (-)
G96204 pdpk1b,pdpk1,LOC108429196,LOC108264442,LOC107747865,LOC107667172 non-coding upstream 207989 753008 ~ 760508 (-)
G96205 ube2i,LOC107677193 non-coding upstream 210865 755884 ~ 808525 (-)
G96202 pdpk1b,LOC108429196,LOC108264442,LOC107677174,LOC107718133,LOC107554309 non-coding upstream 225067 770086 ~ 776473 (-)
LOC103043490 NA other downstream 270852 252340 ~ 265594 (-)
carmil1 carmil1 other upstream 1036988 1582007 ~ 1778100 (-)
LOC103031019 NA other upstream 1266682 1811701 ~ 1815034 (-)
mboat1 mboat1 other upstream 3333677 3878696 ~ 3899248 (-)
LOC107197182 NA other upstream 3604984 4150003 ~ 4178426 (-)
dek dek other upstream 3899210 4444229 ~ 4453002 (-)

Expression


dcakd(dcakd,LOC107667188,LOC107747896,LOC107717668,LOC107554516) Expression in all Baseline Samples

Bar chart with 16 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 25.
End of interactive chart.

dcakd(dcakd,LOC107667188,LOC107747896,LOC107717668,LOC107554516) Expression in each Bioproject

Bar chart with 7 bars.
dcakd(dcakd,LOC107667188,LOC107747896,LOC107717668,LOC107554516) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 250.
End of interactive chart.

Co-expression Network