nov


Basic Information

Item Value
gene id nov
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035907.1
NCBI id CM008310.1
chromosome length 11650534
location 1950534 ~ 1955066 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007256842.3
CTGCAGAGTAAAGTTTCCTCAGAGAGACCCTGAAGAAGTTATCTGCAGCTCCCGCGGCCCGAGCATGCTGAGCAGCGCGTTTCAGAGGAGCCTGGCTCTGCTCTTCTGCTCTCAGGTGGCGCTGTGCTCCGTGGCGCGTCCGCGCTGCCCCGCGGGCTGCCGCTGCCCGGAGGACCCCGCCGTGTGCGCGCCCGGCGTGCATCCCGTCCCGGCGGAGTGCGCGTGCTGCAGAGTGTGCGCGAGACAGCGCGGAGAGACCTGCTCACAGCGCGCGCCCTGTGATGCCCGGAGAGGGCTCCGCTGCGACCGCAGGAGCGGGGTGTGTGTAGCAAACAAAGGAGACTCCTGTATGTTCAATGGTGTTGCCTACCACAATGAGGAGACCTTCTTCCCAAGCTGCAGCTATCAGTGCATGTGTAGAGAGGGCCAGATCAGCTGCGTGCCACGGTGTAACCTGGACGTGATGCTCCCAGGTCCTGACTGTCCTTATCCAAGAAAGGTTCAGGTTCCGGGAGAATGCTGTGAGAAGTGGGTGTGTGAACCTCCCACTGAGTCCAGTGTGCTGGGTGCCTTGGCCATGGCAGCATACAGACAGGAGGAGACGGTGGGCTTTGACCAGTGGGATCCCAGTGTGAACTGTATTGAACAGATCACAGAATGGAGCGCCTGTTCACGGACATGTGGCATGGGCGTCTCCACCAGGGTGACCAACAAAAATCCCCGGTGTGAGATGGTGAAACAGAGCAGGCTATGCATGGTGCGGCAATGTGAAGGTCTGAAGGAGCAGAAAGCCACTCAGCAGCGAGGGAGCAAGTGTCTCAAGATCCAGAAAAGCACTAAGGCCATCCACTTCTCTTTCAAGAACTGCACCAGCACTCAGGCCTTCCGGCCTCGCTTCTGCGGCCAGTGCGGCGACGGCCGCTGCTGCACACCACACAGTACCAAAACAGCTCAAGTGGAGTTCCAGTGTCTAGAGAACAGAGTGACCAAGAGACCTGTGATGTTCATAAACACCTGCGTGTGCCACCACCACTGCCCACGGGACAACATGGCCCACCAGCCCTCTACCGACACTGGCTACGACGGCCTCCAGCTCTGAGAATAGGCTTCTCTGAAGAAAACGTGTGTCTAAAGTGCAGTTTAGATAAAGGCACTTATTCTTCACAGAGTAATGTTTGTACTTTTGTAGAGGGAGAGCTGCAGACAGACATGGTTTAGGAGTGTTGTACCAAATCTCTGCTTGCTGAGAGTCGCAATGTGAAACGCTGCACACCGATCagccataacaataaaacacctGCCTGTTATAGTGTAGGTCCCTCTCGTGCTGCTAAAACAGCTCTGATCCATCCTCTCAACTTTAAAACCTAACTAATTTGTAAGGTGTGACTTCCTTCGATCACATCAGTGGGATAATAGTTTACCATTTTTCATTCTTTGTATTGCTTTTGGTTGATTTTAACCAGGAAAAGcccacaagacctgcctgatttTTCGGAGATGTTCTGATCCAATCATCTAGCCATCCCAGTTTTTCCTTTGTTAAAGTCTCTTAAACCCTTAAAATACCCTGTCCTgcatacaggctacaggtgtagatgatacaaaacccttttttctgcagtaaaataacttatttacgtTCTGAAAatt
>XM_015607742.2
CTGCAGAGTAAAGTTTCCTCAGAGAGACCCTGAAGAAGTTATCTGCAGCTCCCGCGGCCCGAGCATGCTGAGCAGCGCGTTTCAGAGGAGCCTGGCTCTGCTCTTCTGCTCTCAGGTGGCGCTGTGCTCCGTGGCGCGTCCGCGCTGCCCCGCGGGCTGCCGCTGCCCGGAGGACCCCGCCGTGTGCGCGCCCGGCGTGCATCCCGTCCCGGCGGAGTGCGCGTGCTGCAGAGTGTGCGCGAGACAGCGCGGAGAGACCTGCTCACAGCGCGCGCCCTGTGATGCCCGGAGAGGGCTCCGCTGCGACCGCAGGAGCGGGGTGTGTGTAGCAAACAAAGGAGACTCCTGTATGTTCAATGGTGTTGCCTACCACAATGAGGAGACCTTCTTCCCAAGCTGCAGCTATCAGTGCATGTGTAGAGAGGGCCAGATCAGCTGCGTGCCACGGTGTAACCTGGACGTGATGCTCCCAGGTCCTGACTGTCCTTATCCAAGAAAGGTTCAGGTTCCGGGAGAATGCTGTGAGAAGTGGGTGTGTGAACCTCCCACTGAGTCCAGTGTGCTGGGTGCCTTGGCCATGGCAGCATACAGACAGGAGGAGACGGTGGGCTTTGACCAGTGGGATCCCAGTGTGAACTGTATTGAACAGATCACAGAATGGAGCGCCTGTTCACGGACATGTGGCATGGGCGTCTCCACCAGGGTGACCAACAAAAATCCCCGGTGTGAGATGGTGAAACAGAGCAGGCTATGCATGGTGCGGCAATGTGAAGGTCTGAAGGAGCAGAAAGCCACTCAGCGAGGGAGCAAGTGTCTCAAGATCCAGAAAAGCACTAAGGCCATCCACTTCTCTTTCAAGAACTGCACCAGCACTCAGGCCTTCCGGCCTCGCTTCTGCGGCCAGTGCGGCGACGGCCGCTGCTGCACACCACACAGTACCAAAACAGCTCAAGTGGAGTTCCAGTGTCTAGAGAACAGAGTGACCAAGAGACCTGTGATGTTCATAAACACCTGCGTGTGCCACCACCACTGCCCACGGGACAACATGGCCCACCAGCCCTCTACCGACACTGGCTACGACGGCCTCCAGCTCTGAGAATAGGCTTCTCTGAAGAAAACGTGTGTCTAAAGTGCAGTTTAGATAAAGGCACTTATTCTTCACAGAGTAATGTTTGTACTTTTGTAGAGGGAGAGCTGCAGACAGACATGGTTTAGGAGTGTTGTACCAAATCTCTGCTTGCTGAGAGTCGCAATGTGAAACGCTGCACACCGATCagccataacaataaaacacctGCCTGTTATAGTGTAGGTCCCTCTCGTGCTGCTAAAACAGCTCTGATCCATCCTCTCAACTTTAAAACCTAACTAATTTGTAAGGTGTGACTTCCTTCGATCACATCAGTGGGATAATAGTTTACCATTTTTCATTCTTTGTATTGCTTTTGGTTGATTTTAACCAGGAAAAGcccacaagacctgcctgatttTTCGGAGATGTTCTGATCCAATCATCTAGCCATCCCAGTTTTTCCTTTGTTAAAGTCTCTTAAACCCTTAAAATACCCTGTCCTgcatacaggctacaggtgtagatgatacaaaacccttttttctgcagtaaaataacttatttacgtTCTGAAAatt

Function

GO: NA

KEGG:

id description
K23571 NOV, CCN3, IGFBP9; insulin-like growth factor-binding protein 9

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007256842.3 True 1653 mRNA 0.53 5 1950534 1955066
XM_015607742.2 False 1650 mRNA 0.53 5 1950534 1955066

Neighbor

gene id symbol gene type direction distance location
mal2 mal2,LOC107683116,LOC107757438 coding upstream 26383 1911105 ~ 1924151 (+)
colec10 NA coding upstream 44626 1887601 ~ 1905908 (+)
c11h7orf50 cunh7orf50 coding upstream 434797 1498111 ~ 1515737 (+)
LOC103029750 h3f3b,H3F3A,LOC105909691,LOC107388308,LOC101073377,LOC103395674,LOC101167724 coding upstream 464090 1482686 ~ 1486444 (+)
wdr24 wdr24,LOC107747855,LOC107717799,LOC107667227 coding upstream 495046 1439829 ~ 1455488 (+)
LOC103032920 NA coding downstream 119542 2074608 ~ 2085398 (+)
prpf3 prpf3 coding downstream 155811 2110877 ~ 2121710 (+)
ice1 NA coding downstream 171217 2126283 ~ 2148738 (+)
LOC103036307 LOC106588695 coding downstream 196851 2151917 ~ 2167691 (+)
LOC103036916 adcy2a,LOC108429235,LOC108272199,LOC103367001 coding downstream 287104 2242170 ~ 2495068 (+)
G96460 NA non-coding upstream 92639 1810389 ~ 1857895 (+)
G96286 NA non-coding upstream 493647 1364784 ~ 1456887 (+)
G96517 taf2,LOC106594256 non-coding downstream 42805 1997871 ~ 2003611 (+)
G96520 taf2 non-coding downstream 56325 2011391 ~ 2014287 (+)
G96541 NA non-coding downstream 120320 2075386 ~ 2075954 (+)
LOC111193411 NA non-coding downstream 269516 2224582 ~ 2227412 (+)
G96582 NA non-coding downstream 306973 2262039 ~ 2265095 (+)
LOC103040575 ube2i,LOC107677193 other upstream 1141960 799224 ~ 808574 (+)
ddc ddc,LOC107551213,LOC107601670,LOC107746968,LOC107751878 other downstream 1433985 3389051 ~ 3438726 (+)
LOC111193421 mboat1 other downstream 1909924 3864990 ~ 3898919 (+)
ndufaf6 ndufaf6 other downstream 3010404 4965470 ~ 4980947 (+)
c11h1orf43 aqp10a,cunh1orf43,c1h1orf43,LOC108429989,LOC108265981,LOC107714675,LOC107673770,LOC107596410,LOC107723578,LOC107582062,LOC107714677,LOC107677017 other downstream 3852502 5807568 ~ 5850530 (+)
efna3 efna3b,LOC108429914,LOC107699557,LOC108254910,LOC107723569,LOC107677021 other downstream 4325256 6280322 ~ 6382717 (+)

Expression


Co-expression Network