c11h7orf50 (cunh7orf50)


Basic Information

Item Value
gene id c11h7orf50
gene name cunh7orf50
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035907.1
NCBI id CM008310.1
chromosome length 11650534
location 1498111 ~ 1515737 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022674089.1
atttttctaaaagaaagcaTCATCACTGTTACCATGGCAAAGAGTCCGCATCTTCAGTCTGAGGACTCatcaaagaaaaaagagaaaaagaaggcaAAACCAGCTGCCAGCGAGGACAGCGTTAAACAGATTGTGAAGgacaagaagaaaaagaagaggaacaGGACTGAAGAtgagGAGCCTGAGGTGTGTGTCCCTGCTGACAATGTCATAGaagtgaagaaaaagaagaagaagaagcagaaggaaACCGATGCAAATGACAGCACAGAATTTATAAGCACGAGTTCAGACGGTTTAAAGTGTGTAGAAGATATGCAGCAGCCTGCAGAAGAAAAGATGGATGTGGAGAAGGATGAGATGGAAGAGCTGACCCCAGAGGAGATACGGGTACTGGAGAGGAAGTTGAAAAAGATCAGACgaaaggaagagaagaagagattACGAGAGGAAGGAAACAGTAcaaaggaggagaaaaagatCCAGAATGTTGCCCAGACACAGGCTCTCAGTTACCTCACATGTTGGTCAGAGAAGCGAGAGGAGTAATTTCAGAAGACGAGGCAGGTGTGGTTACTGCAGCACATGTATGACAGTGAAAAGGTGTCTGATGATCATTTTGCAGTGTTGTTATCGTATGTGGAGGGTCTGCAAGGAGTTGCACGAGAGACCACTGTGCAGAAAGCAGAGGCACTAGTCCGATGGGACGGACAGGATGGTTCAGAAGGCAGTGCTACCAGAGAAGAAGCCCAGAAAAGAGCTCACAGAGCCAAAGAGATCGTTCAGATTCTCTCATGATCACCAGAGCAGCTTCCCTCTATACCTGTCTGTACAGCAGAGCCTCTAATTACAAACCCATGAGGACTCTTAAATTCTGAGCTGAGCCAGTAGaggataacacacacacaatgtaccCAGTAGTGCGaagaagaaccacagacacatGTAAACCTGTAAATATCTGATGTTAAAGTGCTTTTATAATAAAGATGTTTCATTTTGTGTCACATAAAAA

Function

NR:

description
PREDICTED: uncharacterized protein C7orf50 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022674089.1 True 1015 mRNA 0.44 7 1498111 1515737

Neighbor

gene id symbol gene type direction distance location
LOC103029750 h3f3b,H3F3A,LOC105909691,LOC107388308,LOC101073377,LOC103395674,LOC101167724 coding upstream 11667 1482686 ~ 1486444 (+)
wdr24 wdr24,LOC107747855,LOC107717799,LOC107667227 coding upstream 42623 1439829 ~ 1455488 (+)
rhbdl1 rhbdl1,LOC107747857,LOC102790881 coding upstream 82479 1322114 ~ 1415632 (+)
rhot2 rhot2,LOC107677299,LOC107556678 coding upstream 195332 1277784 ~ 1302779 (+)
wdr90 wdr90,LOC107677127 coding upstream 226609 1224176 ~ 1271502 (+)
colec10 NA coding downstream 371864 1887601 ~ 1905908 (+)
mal2 mal2,LOC107683116,LOC107757438 coding downstream 395368 1911105 ~ 1924151 (+)
nov NA coding downstream 434797 1950534 ~ 1955066 (+)
LOC103032920 NA coding downstream 558871 2074608 ~ 2085398 (+)
prpf3 prpf3 coding downstream 595140 2110877 ~ 2121710 (+)
G96286 NA non-coding upstream 41224 1364784 ~ 1456887 (+)
G96291 NA non-coding upstream 68894 1426258 ~ 1429217 (+)
G96273 NA non-coding upstream 76230 1382425 ~ 1421881 (+)
G96289 NA non-coding upstream 105753 1392008 ~ 1392358 (+)
G96281 NA non-coding upstream 106579 1341561 ~ 1391532 (+)
G96460 NA non-coding downstream 294652 1810389 ~ 1857895 (+)
G96517 taf2,LOC106594256 non-coding downstream 482134 1997871 ~ 2003611 (+)
G96520 taf2 non-coding downstream 495654 2011391 ~ 2014287 (+)
G96541 NA non-coding downstream 559649 2075386 ~ 2075954 (+)
LOC111193411 NA non-coding downstream 708845 2224582 ~ 2227412 (+)
LOC103040575 ube2i,LOC107677193 other upstream 689537 799224 ~ 808574 (+)
ddc ddc,LOC107551213,LOC107601670,LOC107746968,LOC107751878 other downstream 1873314 3389051 ~ 3438726 (+)
LOC111193421 mboat1 other downstream 2349253 3864990 ~ 3898919 (+)
ndufaf6 ndufaf6 other downstream 3449733 4965470 ~ 4980947 (+)
c11h1orf43 aqp10a,cunh1orf43,c1h1orf43,LOC108429989,LOC108265981,LOC107714675,LOC107673770,LOC107596410,LOC107723578,LOC107582062,LOC107714677,LOC107677017 other downstream 4291831 5807568 ~ 5850530 (+)
efna3 efna3b,LOC108429914,LOC107699557,LOC108254910,LOC107723569,LOC107677021 other downstream 4764585 6280322 ~ 6382717 (+)

Expression


Co-expression Network