LOC103037205 (tmem65,LOC108429253,LOC108271490,LOC106922370,LOC103135153,LOC106953768)


Basic Information

Item Value
gene id LOC103037205
gene name tmem65,LOC108429253,LOC108271490,LOC106922370,LOC103135153,LOC106953768
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035907.1
NCBI id CM008310.1
chromosome length 11650534
location 3759945 ~ 3859872 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022674134.1
CGCGGCTGGACCCGAGCGCTTAGTATGAGCGAGCGCTCTTGCGTTTAAAGTGCCCTAGTTATGCCCCCTCTCTCTGTGTGGCAGTTATTTGGAGCGCGACCGCTGAGTCACGCCCAGCGGCGAGAACGTAAGCCCCAgtagtttactgtaaaaaaaaagggaaaaacacagCGGCTGGTGAATGTCGTCATAGCGACGTAAAGCCCGAGCCGAGGCGAGTTAGCGTTAGCTGAACAGCAGCGGGAGACGGAGGAGCGGCGGAGGCTGGAGCGAAGCAGGAGGACCGCGGGGAGAAATGCTCGAGTTCGGGTCAGTTTTCCGGGCGGCGGGTAAcgttatctgctgctgctgagagagagacagagggtcGGTGGATGGACACGGGGTTTCAACGGCTCTGACTGCATGCTGAGCGGCTAGCGGCGGTAACGGGACACGGAGGCTTCTCTCTATGCTGGTTCCCCTCACTCTCTCCTCCATGTTGCCGTGTGTGCGGAGAGCCCTGCAGCCCACGCTGCTCAGGGTCCTTAGGCCACCTCTGTGTGCAGCCAAGGGCCACGCTGCCAGTCTGGGCACACACGCCCGCAAGGAGCCTGTGGAGCCTTTGACTTCACCACAGGGAGCACGAGACTTTATCTACGGCCTGCATCCGTCTGAGCGTTCATGCCTGCTGCGCGAACTGCACCGCTTTGAGTCTATAGCCATTGCTCAAGAGCAGCTGGAAATGGCTCCCCCAACTGCAGCTCAGCTCAGATATGttcTGCTTCACAATGCTATCCCCTTTGTTGGCTTCGGCTTCCTGGACAATGCCATCATGATTGTTGCGGGCACACAGATCGAGCTGTCCATAGGAGTGATCTTGGGCATCTCAACCATGGCAGctgcTGCACTGGGAAACCTGGTATCAGACTTGGCTGGACTTGGtcttgcAGGTTATGTGGAAGCTCTGGCTTGCAGGCTTGGCATGCAGATTCCGGATCTGAGTCCCAAACAGGCTGATATGTGGCAAACCAGAGTCAGCTCTCATACCGGCAAAGCCATCGGAGTGGGCATCGGCTGCATCCTAGGCATGTTTCCCCTCCTCTTCTTCAAAGATGATgatgagaagaaaaaagagggagGGGAAGAGCAGACATCTTCTCCTGCTGTCACCTCCAAAAGCGCATGAGGAGAACGAACTGCTGCTCCTCCTGTAAATGAAAGAACCCTGGTTGAACCATTCCTCGAGCTGCTGATTGCAGCATCATTTCACCCTGTTGCAGCAGGCACTCCATCTCCAACTAACACCATGCGCATGGATTTCTTCAACAGAGTCATTGTTCTAGAACTCTGAGGTACTTGGGTCAGACTTTCAGGCAGCACACAGTTCCTGAGGTATTGAATGAGCAAATGAGCTTCCTTCAGCCATTCAAGCTGATGCttcaattatttatatatattttttgtgagtTCCTCCTTCAGGATTTATAACCGAAATGTCATCAGGTGTGGGTGAAGGTCACGCTGACAGCCCATAAAGAACTGTAAAGCCGACAGGCCAGCAGGGGTGCAGAACACTGGGGTGTCACTAGAGACACAGCGAATTCAGTCagagggccctatcttacaccctgcgcaaggtgtattGTGATGCCCATTGTTAttttacaccccaccaacagccTGCGCCATTAAAGTAGCTTCggagcttgtgaatatatctacgccaaTAGacatggtggtctgaaagtgaggtttgttcagataaatttctggtgtattgctatcttggcaatgtaaaacacaggtgcaccactgtctAAAATTAACCTAGATAACAGTAATTattcagatgttcattgctaacTTGGCAATGCAGGCGCTGGAGGTGCCTAATGGGGGTACACCCCCACTTGTTACATCCacaaggacatgcagcagtgcacaaacccaacttttacacccacagtaaacagaatacaaaattaaatcataaaaaaca

Function

symbol description
tmem65 Involved in regulation of cardiac conduction. Acts upstream of or within cardiac ventricle development. Predicted to be located in mitochondrial inner membrane. Predicted to be active in mitochondrion. Is expressed in female organism and heart. Orthologous to human TMEM65 (transmembrane protein 65).

NR:

description
PREDICTED: transmembrane protein 65-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022674134.1 True 1981 mRNA 0.52 8 3759945 3859872

Neighbor

gene id symbol gene type direction distance location
LOC103035455 LOC103035455,LOC108429251 coding upstream 18681 3653800 ~ 3741264 (+)
grb10 grb10,LOC103031323,LOC107551212,LOC107751877,LOC107746967 coding upstream 387259 3284027 ~ 3372686 (+)
cobl NA coding upstream 487342 3147369 ~ 3272603 (+)
LOC103037869 triob,LOC108429234,LOC107746974 coding upstream 753571 2736129 ~ 3006374 (+)
LOC103036916 adcy2a,LOC108429235,LOC108272199,LOC103367001 coding upstream 1264877 2242170 ~ 2495068 (+)
e2f3 e2f3,LOC108429255 coding downstream 41817 3901689 ~ 3915719 (+)
LOC103038805 NA coding downstream 63789 3923661 ~ 3925572 (+)
tmem158 tmem158 coding downstream 302002 4161874 ~ 4164337 (+)
LOC103035111 NA coding downstream 310574 4170446 ~ 4194866 (+)
decr1 decr1,LOC107580031,LOC107756153,LOC107704989,LOC107705494 coding downstream 342091 4201963 ~ 4225743 (+)
LOC111193419 NA non-coding upstream 5175 3753172 ~ 3754770 (+)
LOC111193420 NA non-coding upstream 7248 3751492 ~ 3752697 (+)
G96915 NA non-coding upstream 31372 3727932 ~ 3728573 (+)
G96912 NA non-coding upstream 43544 3713518 ~ 3716401 (+)
G96888 NA non-coding upstream 177180 3533546 ~ 3582765 (+)
G97000 NA non-coding downstream 72939 3932811 ~ 4195776 (+)
G97029 NA non-coding downstream 236262 4096134 ~ 4165899 (+)
G97035 LOC103034794,LOC108437355,LOC104937918 non-coding downstream 336076 4195948 ~ 4197937 (+)
G97038 NA non-coding downstream 366068 4225940 ~ 4287454 (+)
G97042 NA non-coding downstream 382658 4242530 ~ 4256999 (+)
ddc ddc,LOC107551213,LOC107601670,LOC107746968,LOC107751878 other upstream 321219 3389051 ~ 3438726 (+)
LOC103040575 ube2i,LOC107677193 other upstream 2951371 799224 ~ 808574 (+)
LOC111193421 mboat1 other downstream 5118 3864990 ~ 3898919 (+)
ndufaf6 ndufaf6 other downstream 1105598 4965470 ~ 4980947 (+)
c11h1orf43 aqp10a,cunh1orf43,c1h1orf43,LOC108429989,LOC108265981,LOC107714675,LOC107673770,LOC107596410,LOC107723578,LOC107582062,LOC107714677,LOC107677017 other downstream 1947696 5807568 ~ 5850530 (+)
efna3 efna3b,LOC108429914,LOC107699557,LOC108254910,LOC107723569,LOC107677021 other downstream 2420450 6280322 ~ 6382717 (+)
G97678 s10a1,LOC108429935,LOC106570100,LOC105901452,LOC105027143,LOC108437929,LOC106588175 other downstream 2672644 6532516 ~ 6565003 (+)

Expression


Co-expression Network