nbeal2 (nbeal2,LOC107596634)


Basic Information

Item Value
gene id nbeal2
gene name nbeal2,LOC107596634
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035907.1
NCBI id CM008310.1
chromosome length 11650534
location 11543223 ~ 11650498 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022674350.1
GCGCTTTGAAGTTCCGCGAGGATTTCGCTCCTGACAGGCATGAGCGCTGGCGCGGTATCACTCCGGAGTGTTTTTCCACGTGCTGCGGGCTTCACTCTCCGACTGCCGCAGCTGGATTCACACAGATAGAGCCATGCGCCACGCAATCCACGCAACTTTCTGCGCGCGGAGCAGCAGGTAGAGCGAGCCCTCCGTCCCCCGCCGCCGCTCGCGCTGCTGAAGAGGAGCATGCACTGTGTGATCTTAtgcgcgtgagagagagagtgagagagcgagctCGGGTGAACttggaggagtgagagagtgaggaaaaCCAGGGGTGAGCGGGAGAATGGCCTCGAAGGAGCGGCTGTACGAGCTGTGGATGTTATACTACACCAAGAAAGATGTGGGCTACCTGCAGCAGTGGCTGGAGGCGTTCGTGGCGACCTTCGAGAAAATCATTGACGTGCAGTCTCTGGAGCCGCGCCGTCTGGAGGAGTATAATGCAGAGGTTCCCCTGCTGCCCCGGGACGTCTTGGTGTTCCTCAGCACTCAGCTCTGGCACAGTGTTCTCCATCTCTCCGGTCAAAACCAGAACAACACAGCACCGCACCCTCTGCTGCTCATCAAGTTCTTCATCATCATTTGCAGGAACTTGGAGAACATTGACCCTGAGAAAACCCCTGGCTTTATCCTGGAGACCATCAAGTTATTAAACTTCTGTCTGAATCAGttaaAGAAGCAGCCGGAGGAGCAGAGCTCTCTGCAGTGTGTGATCCAACATGGTCTGCTGCTGTGTGAAAATCTGTTCGACCCCTATCAGACGTGGAGGCGGCGGCAGGCAggtGAGGAGGTCAGCATGCTGGAAAGAAGCAAATATAAGTTCTCCCCTCTCAGCCTGCCAGAGGAGCTGCCTGCGTTCTTTCACGATAGCCTGCGGGAGAGTGAGCTGATTTCCGAGCCGCTGCTGCTAAGGTTGCTGCATCTTCAGGGTGCTGTCATCAGCGGCTGCAAGaagAATGGCCTGCTCTGCATCACGCCCAATGCTGTGGAGGACCTGATGTGTGTCCTGCGCTCCTGGTGCCTCCGCCCCTCCCCGCAGACCCCCCGGGACCCCCTGGTGTTGCGGCAGGCGCTGCGCTGCCTCACAGCGATGATCCACCTGCTGCATGGGAGCAGCCCTGCGGAGAGGCAGCTGGAGATCCGCAGCGTCCTGAGCAGCTACTTCCAACTGCTGAACTGGAGCAGACCGCCGGACAGCGGGCAGGGGGACGGGTCGGCCTGGGAGGACAGCATCATCCTCCTGCAGACGCACATGCTCAATGCTATCCCAGAGATCCTGCAGTGTTCAGACCGGCCGGTTCTGCAGGCCGTGTTCCTCAACAACAACTGCTTTGAGCACATCCTGAGACTCATCCAGAACAGCAAGGTCTGGGAAAAAGGTTCTGACTGTATTACAGTGCACGCCATTGGAGTACTCACTGCTATCATGAGCAATTCACCTTCTGCTAAGgaggtgTTTAAGGAGCGGATTGGTTACTCGCAGCTGTTTGATGTGCTGAAGAGTCAGGGTCAGCCCACCAAGAGACTCCTGCAGGAGCTGATGAACATGgCAGTAGAGAACGATCACGCTCAGTCTCCTCAGTGTGGGATCAGTAATGATCAGccgttgctgctgctgctgcagtggcTGCCGGAGCTGTCCTCCCGCTCTCTGCAGCAGCTGGTCTCCCAGTGGCTGGCGGCCGTGTGCCGGGTCAGCCTGTCCAGCCGCACCGTGGCGGTGGAGGCCGGCATGGTGCGCCACCTTCTGGACGCGCTGTCGGAGCCGCCGGATCGCCTGGACCGCCAGTGTGCGGACGCCCTGCTCGGCCTGCTGCAGGACCTGGGCTCTCTGTCCCTGCGGCCCGCGGAGTTAAAGAGCCTGCTCAAACTTCTAAGAATGGAGCCCGGGGCCCCACCGCACCCCTACACCGCCCGCACCATCCGGGTGCTGTCTGCCATGGCCGCCAGAGGGCCGTACCGCGGGGAAAGAGGCAGCAGTGCCCTGCAGTATTTCGATCTCACGCCCCCCATGGCGGGCATCATGGTGCCCTCCATACAGCGCTGGCCGGGCAGTGGCTTTGCCTTCCATGCCTGGCTGTGCCTCAACACCGAGTTCCCGCCTCCACAGCAACAGCACCACTCAGAGTCCCGCGTCACAGCCCCCGACAGCATGCTCCGCATGGCCAAGGGTCCACGCCGCAAACAGCTGTACagcTTCTTCACGGCGAGTGGAACGGGCTTCGAGGCGTTCTTCACCCCTGAGGGAGTGCTGGTTGTGGCCGTCTGCACCAAAAAAGAGTACATGGCTGTCTCCCTGCCTGAAACCCCCCTCAACGACTGTGCCTGGcACTCTGTAGCTATAGTGCACATCCCGGGCCGCAGGCCGTTTGGACAGAATCTGGTGACTATCTATGTGGACGGGGCCCAGTGTAAGATGGCACAGCTGCGTTTCCCCTCCCTCAACGAGCCTTTTACCTCCTGCTGCATTGGTTCGGCAGGTCACCggaccaccaccaccaccactaccccCTCCCCCACACTGCCCCCGCCACTGCACTCCCCTGACCTGACCTTCTCTATGGCAGCCGGACCCCCAATGCTCACCCGCTCACAGTCCTTCCCAGCATCCTTTGCGGCGGGGGTGTGGGGGTCTGGCAGAGAGGTCCCAGTGCACACCATCCCCGCGGGGCTGCAGGACACAGAGTGGGGTTCTCCCTCGTCACTGGATGGCCTGCTGGCCACCGCATTCATCTGCCACGAGGCACTGCAGCCTGCGCAGACCCGTGCACTCTACATGGCAGGTCCAAACAACGTCTCGCTGTTTAAATCGGATGGAGAGCTGTCGGAGCTGTGCAATAAACTGCTGCTGTACTACACCCCTCAGgcTTTTAAAAACCAAATCTGTCTGGATCTGTCTCCTAACCACCTGTACAACGGCAGACTGACTGGCCACAGAGTCGTCAACTGGGATGTCAAGgatgtTCTGAACTCTGTGGGTGGGATAGGGGCACTGCTCCCCCTTCTAGAGCAGGTGTGTGGGGTGGAGCAGAGTGAAGCTGGAGTTCAGGAGACCTCAGACCTGTTGGGACCTGAGCTCACCTCCTCCAGAGGAGCCACCGGCATGCTGCTGCCACTGGGCAAGTCGTCTGagAGTCGTTTAGAGAGGAACAGTGTGGCTGCTTTCCTGCTGATGGTCAGGAACATGCTGAGGAACCATCCAGTCAATCAGGAGAGTCTCCTTCACTGCCACGGACCTGCCATCATGGGAGCCATGCTCTGCaaggTGCCCAGCTCTAGGATGGATATGAGTGTGTTGATGGCGTGCCAGCTGTTGTTGGAGCAGGTGGGCAGTGAGGGGAACAGTGCATTACTGTCTCAGCTCTATCAGCACCTGCTCTTCGACTTCCGCATCTGGAGCCACTGCCACTTTGCCGTCTGCCTCGggcaTGTACAGTATCTGTCCTCAGTGTTGAAGGAGGGTAAGCTGAGAACGCGCAGAAAGTACGGGGTTCAGTACATCCTGGACTCCATTCGCTCACACTACAGtgtggaGAGGGACGGCAGTGCTCTGTCGGATGAGAAGCAGACGGTGCAGATGTCTCTCTTTACTCTACTGAAGGATTTCCTGCTGAAATCTCCCACTAATGAGGAGCTACACAGTGTGCTGGCTTACACTGCTGTAGTGACCGACCAGCTACAGGCTCTCAGTGTTCTGGAGGTGGTATACACTGTACTGAGGAGTTACCCCCATGCTCTGACGGTGCTGGTGGAGTGGGGGGCGGAGCAACTGTACTGCCTGCTGCTCAAACCCAGCTTCGGAGACGAGGCCCGAGAGAAAGTGTTCAGAATTCTGTATAAAGTTCTGAAGAGTCAGCAGGTTCCAGAGCGGAACAAGCAGCGGGTGAAGCTCAGAGAGTCCAGCTACCTGGGCCTCGTCTGTTTCCTGGAGGAAATCCCCGTCACCATGACGATCATCCGCTGCCTGAGCGAGCAGGTGCTGGCCACAGATTCTGCTCCTAACTTCAGGGACTTGTTGACGGTGGTTTATCTGTCCCATCGAGCCGATCTGTCCACCCGGCTGGACATTTGCCGCAAGCTGTTCTACCTGATCTACAGCAATGAGGACTGCGTGAGGCAGCTGGCACGGCAGCCAGGCTGGCAGGACATTCTCACCAAACTCTACGTCAAAGAGTCGTACGAGTCCCGTGCCGTCAGCGAGCCCGGCACCAACCACCAGACGTCTGTAGAACCCCTCCCGTCCAGACCCATCCTGCGGCGAGACGATAGCGTGGTGGAGGAACCCAGGAACAACATGTTCATCCCTTACAACTCCCACCACGAGGAAgacgaggaagaggaggaggaggtggaacCTACTCCAGACGTCTCTGAGGCCTACTCTGAGGGCTTCTCTGACCTGTCCCAGTCTCCGCCCCCTGGTGGTCAGCTGAAGAACTTCAGTGACTCCCTCAACTTCAAGTCATTCGACTCGATGGATCGGGGCAGCCGCTCGTCCTCCCTGTCCAACACCGTGGACATCCCGTCCTCCTCTCGGCTGCTGGAGGAAGAAGAGGGTCTGTATCAGCCGCTCTCTCCCTTCGGCACCTCGCCCTTCGAGCTGGACCTGAGCGGCCAAAAGGGTCCTCAGACGTCCCTGAACTGCCAGCCAGAAACTCCTTCACCACTGGAGCACAGCAAGGCTTTCCCCGGCCTCAGACCCAGAAAGAGCTCCAGCCTGTCCAACGTTCTCGACGAAACCAGCTACAACACAGAGCCTCCAACTTCAGACaccatctccaacaactccaatCCACAGcaGGCTCCAGAGGAGGAGTTGTGTAACCTGTTGACGAACATTGTGTTCAGAGTGTTGTGGAGTGGTGCTGATGGCTGTGAGGATGcagtgtggagagagagaggccaggTTTTCTCAGTTCTAACCAAACTTGGCTCCTCCTGCCAGCTTGTGCGACCACCTGATGATATCAAGCGCAGcatttTGGAGATGATGTTGGAGTCGTCTCTGTCCGATCTACGGGATTCTCAGGGATCAACTCTGTCCCATATACCATCTTTGCTCCGCCTCCTCAGACTGTTGCAGGACTTCCTATTCGCTGAGGGAACAGACAATCAAACCCTCTGGAGTGAAAAGATATTTGAGGGTGTTGTGAATCTCCTGGATCGGCTGCAGGCGTGGCACACCACCTCTACCACAGCTGGAGGAGCTGAACTAAAGGAAATGGCTCAGATCGGCCTGAGAATAATCACCAGATACATCCAGCAACAGAACTCACAGgtgtgtgtgatggCGTGTGTAAAGCTGCACACTCTGCTCCAGACGGTGTTGTGTCTGTCGTGGGAGGAGGTGTGTTTTCTGCTGGGGCGGCTGGGGGAGGCTCTGTGGCCTGCGGGGGGCGCTGGTGAGAGGGTGAACTCGGGCAGGGAGGCCCTCCTGGAGCCGCTGGTGCCGGTGGTTCGGACGCTGCTCGACCAACACGCCGACCCGACCAAACTCCAGCAGCTGCTGCCCAGCCTGCCCCGCACCAATGGCAGCCCCACCTTCGCTCAGGACCTGCACAGGTACTGCAGCACCGCAGAGTGGCAGCTGTTCTACCACAACCacGTGGGACCCACTATGCAGCAGTATGAGCTGGATACGTTTGGAAAAAGCCACGACTTGATGTCCAACTTCTGGAACTCATGTTTTGATGCGCTGATGAGCACCGGCCAGAAGAGGGACAAAGACAGAGCGGACTGCAGGGCCAAGTTTCAGgagcTGATTGTAGACCCGTTCCTGAAGCGGGTGCGCAGTGAGAACAGTCGGTACGGGAGTGTTCAAAAGCTGAGTAACGGCCAGCAGGGGGTGGTGTGGAAACACTGGAAGTCTCAGCGCCGGATGCTGACCAGTCATAGAGGAGCCTGGGCCAACAGGGAACAGCCGGAGGTGAAGTGGAAGCTGTCGAACGCAGAGACGTACTCCAAAATGCGACTGAAGCTTGTGCCAAACTACAATTTCAGCCCCCACAGCGAGGCCAGTGCCCTGCGGGATAACATGGGAGCTGAGAGCCCCCGGAGCTCAGAGCCTCTCCCGTTGGCTGTTGCTAAGGAAGCTAAAGTCAGTGACATGCAGGATGACCACCTAGAGGAGGAGGACATCATGTACATTGACAGCCAggggGAGGAGGCGGAGGAGGAGAGTCAGAAGGAGAAGCTGGTTCTGTCGGAGGACTGTGAGCTCATCACTATAGTGGCGGTGGTGTCGGGTCGGCTGGAGGTCACAACTCACCACATCTACTTCTACGACGGCAGCAGCGAGAAGGAGGAGACTGAGGAGGGTATAGGTTTTGATTTTAAGCGCCCGCTGTCCCAGCTGAGAGAGGTCCACCTGAGACGCTACAACCTGCGGCGCTCCGCCCTCGAGCTCTTCTTCATCGACCAGGCGCACTACTTCATCAACTTCAGGAAGAAGGTGCGGAACAAGGTCTATTCCAGGATTCTGGGACTGCGGCCGCCGAACCTGTTTTATTTTGGTTCCCGTTCCCCTCAGGAGCTCCTTAAAGCTTCCAACCTcactcagAAATGGGTGTGCAGAGAGATTTCGAACTTTGAGTATCTGATGCAGCTCAACACCATCGCCGGCCGCACCTACAACGACCTGTCCCAGTACCCTGTGttccCCTGGGTGCTGTGTGATTACACCTCCTCTGTACTGGACCTGGAAGACCCAGCTGTGTTCAGAGATTTGTCCAAACCCATTGGAGTGGTAAACCCTCGTCATGCCCAGAACGTCAGAGAGAAgtatgaAAGCTTTGAAGACCCCACAGGCACAGTTGATAAGTTCCACTACGGCACACACTACTCTAACGCAGCGGGGGTCATGCACTACATGATCCGCATGGAGCCCTTCACCACCCTGCACATACAGCTGCAGAGCGGCAAgtttgaCTGTGCAGACCGGCAGTTCCACTCAGTAGCTGCAGCCTGGCAGGCTCGTATGGAGAGTCCGGCTGATGTTAAGGAGCTCATTCCCGAATTCTTCTACTTCCCAGAATTCCTGGACAACATGAATGGGTTTAACCTGGGCTGTCTGCAGGTGAATCAGGAACAGGTGAATAACGTGGTTCTGCCGCGCTGGGCCTCGTCTCGAGAAGATTTCATCAGAAAACACCGCAAAGCTCTGgagAGCGAGCATGTGTCTGCACACTTACACGAGTGGATAGACCTCATATTCGGTTACAAACAGCGCGGACCTGAGGCAGTGGAGGCTCTCAACGTCTTCTACTACTGCACTTACGAAGGTGCTGTGGATCTGGATGCTATAGCCAATGAGACGGAGCGGAAAGCTTTGGAAGGCATCATCAGCAACTTTGGACAGACCCCCTGCCAGCTCCTCAAGgAGGCCCATCCACCCCGCATGTCTGCAGAGAATGCATCCCGACGGCAGTCCCGGATCGACACTTTACCACCAAACCTCTTCGAGCAGCTGGACAAACTGCGGCCGATTTttatctctgTGGTGAGTGATGGTGTTCCTCTAGTTCAGGCTGTGGTACCCAGGAACCAAACACGGAGCTTCATCATCCAGGGCTCGGACGTACTGGTGAGTGTAAGTGCTAACGGGCAGATCGGAACACACAGCTGGCTCCCCTACGACAAAAACATCGCCAACTACTTCACCTTCTCGAAGGACCCCACCATGAGCAACCCAAAgACCCAGCGGTTCCTGAGTGGTCCATTCTCCCCAGGAGTTGAGATTGGAGCCCAGGTGCTGGTGGTCTCCAGTGACGGCCGGCTGCTGTTCAGCGGGGGACACTGGGACTGCAGCCTGCGCGTCACCATGCTGGGGAAGGGCAAGATGGTGGGCAGGATCTGCAGACACATCGATGTGGTCACTTGTCTGTCTTTGGATTTGTGTGGAATCTACCTCATTTCTGGCTCTCGAGACACCACCTGCATGGTGTGGCAGGTCCTTCAGCAG

Function

symbol description
nbeal2 Acts upstream of or within platelet formation. Predicted to be located in endoplasmic reticulum. Human ortholog(s) of this gene implicated in gray platelet syndrome. Orthologous to human NBEAL2 (neurobeachin like 2).

NR:

description
PREDICTED: neurobeachin-like protein 2 isoform X1

GO:

id name namespace
GO:0030220 platelet formation biological_process

KEGG:

id description
K23286 NEBL1_2; neurobeachin-like protein 1/2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022674350.1 True 8005 mRNA 0.57 52 11543223 11650498

Neighbor

gene id symbol gene type direction distance location
LOC103045287 si:ch211-257p13.3,LOC108412665,LOC108271642,LOC107685558,LOC107596636 coding upstream 30481 11476544 ~ 11512742 (+)
LOC103038511 LOC103038511 coding upstream 73120 11465165 ~ 11470103 (+)
gba gba coding upstream 99841 11421534 ~ 11443382 (+)
dap3 dap3 coding upstream 122883 11409458 ~ 11420340 (+)
LOC103022365 jarid2a,LOC108443719,LOC108265176,LOC107657689,LOC107593646,LOC107714830,LOC107595576 coding upstream 261753 11187149 ~ 11281470 (+)
G99269 NA non-coding upstream 32848 11509263 ~ 11510375 (+)
G99255 NA non-coding upstream 138013 11404781 ~ 11405210 (+)
G99244 NA non-coding upstream 178950 11361241 ~ 11364273 (+)
G99119 NA non-coding upstream 367234 11166429 ~ 11175989 (+)
G99115 NA non-coding upstream 388223 11145057 ~ 11155000 (+)
LOC111188200 rusc1 other upstream 240338 11294092 ~ 11302885 (+)
abhd16a abhd16a,LOC107717442,LOC107723554,LOC107582042 other upstream 495533 11028822 ~ 11047690 (+)
LOC103033199 NA other upstream 515799 10999925 ~ 11027424 (+)
G98967 NA other upstream 1044705 10493791 ~ 10498518 (+)
G98934 grik5,LOC107551699 other upstream 1364764 10172553 ~ 10178459 (+)

Expression


Co-expression Network