CI01000012_00017728_00018696


Basic Information

Item Value
gene id CI01000012_00017728_00018696
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 17390 ~ 20792 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000012_00017728_00018696.mRNA
AGATAAAAGACAAAAAAAGAAATAATACAAATACAATAATCTGTTGTTTTGTTGTGTTGATAGTACGTTTTATTGCAGTGAACCATTTCAGTCGTCTATCGGGACTAACTCTTTATGCCCCAAATAGAAACTGTATGAAATGCATGTAGGCTATGCATTTATATTATAGTAGTACCTTGAAAAAGTAAACTTTAAGAAATAAGCAGCTTTATTGAGTGTTTGTGCCCAAGACACTAACAAAAAAGGATTTACAAAAAACACATTTATATTTATTTACAGTTATGCTTTTGGCAGATACTTTTATCCAAAGTGAATTACAGTGCTCTTATTACAGGGACGATCCCCCTGGAGTAAAGTGTCTTGCTCAAGGACACACTGGTGATGACGGCTGCAGAGATCCAACCAGCAAACTTCTGCTTATAAGTTCAGTGGTTTAGCCCACTACACCACAAAAGTAATAAAGCTACAACAGAAATTATCATGTAATTGTGAAAATATTAAATGAAATATTGCAAGAAACGGAATGCTGACATGAATTGTAAAACGTTTTAATCGGTTTAAATGTTTTACAGGTAGCCTTGCTGATGGAGAGCAGGCACACAAATGTTTGGAGCAGACACAGCGGCAGCCAGATTGTCCTGCACATCTTCTCCCACTCTTGCTTCAAGATTGTAGGGTTCAAGGGTCCATCATCATGGTCTTCCTCATCCTCTGGATCAACGATGTCCCCATTGAGAAGAGCAGCAATGAGGGACATGATGGATAGCAATGAGGGACATGATGGATGGCAAAGACAGGCGAAGGTGTTCATGGTGGTAAGCTGCTTCATCAAAATAAGACTGCAGAATTGGCACAGCTGTGTTGAGATGGCAGCAGGACTGTAAATAGGTGATTGTTAGAACAATAAGTTTGAATGCTTTGTTTCATGTGTTGTTGACTTGTCATATATGTATTTATTTATTGTGATGGTTACTTTTATTCATTCTATAACTCATTTATGTTTCCTATTGTTGTCAGTAAATAAAATATAATTTATTATTCATGCATTTATTTATTGCTTGACTGCAAATTGAGATGCATTCACCTTGGCTGCATTTGTCTAGTGTGTATTCATGCATAGCTGTGTCATATGACCAAACAAATTACATTTTGATTGTTTTAATAAACATTTTTTAGTAAAAAAACGTAATATAATGAAAACCGTTCTAGGTAGGGCTGTCGAGTTACTGGTGCTATGAGGTGTTAGTGCACCTGACACTTTTTTTTTTTATTGCAGAACTTATAATTACATACAAGATCAGGGTAAATACCATGGTTGTATCTTTAACAATGAACAATCATAATGACAAAAAAAAAAAAAAAAAAATCAATATCATGGGTTTGTGTACATCATAGTATGAGATTATATACACAGAAAAGCACAATGACAAGGTTAAATATCAGAATAATTCATCATAAGGCTTCAAAAAATATATTTTTTTAATATATTTTTGTATTTATAAGCCTGAGCAAACAGCAGTTCTTGTGAAGTCCAATGAGGAGTTAAGGTTGAAGACATCAGAGCTCGAATGATATAAACAGAGATGGAATCTTCGGATTAAAGGGATGTGTAATGATGGGTCAACAGAATGGGGATCCATTTGCAGCTTTTATTAAGAATAGTATATACACAGGTAAGGGCAGAGGCAGAGACGTAAACGGGGACAGGCAATGGTCGAGGCAGGCGGCAGACAAACGGTATCAGGAAGCAGGCAGAGATCAGGGCAGGCAGCAAACAAACACAGTCCAGTAACCAGGCAAGGATCAAGGCAGGCAGCAGAGAATCACAGGAGATAAACAGTCCAATCGGCAACAGTATAAACAATCCACAGAAAACGCTTAGAAATGATCACCGGGGCAAATCAAGACTTCGCAGTGTGTGTGTGTGTGTGTGCTGCTTAAATAGTGTGAGTGTGATGTGATGCAGGTGTGTGCGCAATCAGTCCCAGGAATGAGGGCCTATGGGAAATGTAGTCTGAATGATAGTCTCAGTATTCCGGTGAAGGCTCCCTCCGGTGGTGCGGGGGAGGAAGTGCGGGAGCCTCACTTGTGACAGGATGAAAGAGCATGCTGACGAGGATGCACGGAAAGAGGTGATTGAACTTTTGAGTAACATAGCTCCACATCTGGCAAAGAAGCTGGAAGATGTCGTCGACTCTGTTCACCGGATTGGAAAAAAGGAGAGTGGAAGACACCATCAAATGATTGTTCAGTTTGCCATGTGTCGATACAGGGACGAATTTTGGAAGATTACAAAGAACTCCCAGCTGTGCACTGAACGTGGAATCAGGTTCGTGGAGGATCTGTCAGCTGAGGACCGGAGTGCTCGTGCAGCTCATCCAGGAAGCCAGAAGCGCCGGAAACTCATTCAAGTGGCAGCAATTGTACTTTTTGGTTTAATCAGTGGGGTGAACCAATTTGATTTGCTCATGGCACAAGTCGATCAGGAGGTGTTGCTTTTCTTTTTAACAACTTCCCTGGGAAACTTGCTGAATCAAGATCTAGTTAGGATGGACATTGTTCAATTTTTTGAATGCAAAATAACCATTGTTACATTGTCTTATGAAAATGTGTATGGTTATAATAATTTGTCCCAAAACAAACTTTTAATTTCAGAAATATCACTGATATTAGAGGAATGAAAACAAAATATGCTACTGATTTTATTGTATTGGGTGGTGACTTTAATATGGTGTATGATGAGTGGTTAGATAGGTCACCAACTAAATATAATGTGAATCATTAAAATTCACTATTATTACACTTTTGTAATAATCAAGGTTTAATAGATCCCTGGCGTGAATCAAACCCCTGTCTAAGACAGTTTTCTTGGTTTAAATCTGATGCCTCTATCATGTCCCGAATTGACTTTTGGTTAATTTCTCATAGCTTTTTGCCCTATCAAACTATATCTAATATATCGGCAGCTCCCCTAACAGATCACTGTTTAATTGAATTGATGATAAATCATAAGAATAAA
>TU78027
ATACACAGGTAAGGGCAGAGGCAGAGACGTAAACGGGGACAGGCAATGGTCGAGGCAGGCGGCAGACAAACGGTATCAGGAAGCAGGCAGAGATCAGGGCAGGCAGCAAACAAACACAGTCCAGTAACCAGGCAAGGATCAAGGCAGGCAGCAGAGAATCACAGGAGATAAACAGTCCAATCGGCAACAGTATAAACAATCCACAGAAAACGCTTAGAAATGATCACCGGGGCAAATCAAGACTTCGCAGTGTGTGTGTGTGTGTGTGCTGCTTAAATAGTGTGAGTGTGATGTGATGCAGGTGTGTGCGCAATCAGTCCCAGGAATGAGGGCCTATGGGAAATGTAGTCTGAATGATAGTCTCAGTATTCCGGTGAAGGCTCCCTCCGGTGGTGCGGGGGAGGAAGTGCGGGAGCCTCACTTGTGACAGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000012_00017728_00018696.mRNA False 3019 mRNA 0.38 2 17390 20792
TU78027 True 432 lncRNA 0.52 1 18696 19127

Neighbor

gene id symbol gene type direction distance location
CI01000012_00074656_00075480 NA coding upstream 53793 74585 ~ 75763 (-)
CI01000012_00095178_00097740 NA coding upstream 73873 94665 ~ 97740 (-)
CI01000012_00176813_00177864 NA coding upstream 155836 176344 ~ 177926 (-)
CI01000012_00178282_00181473 NA coding upstream 157390 178182 ~ 183012 (-)
CI01000012_00223417_00223713 NA coding upstream 202423 223215 ~ 224149 (-)
G68489 NA non-coding upstream 4378 25170 ~ 25467 (-)
G68492 NA non-coding upstream 8427 29219 ~ 144712 (-)
G68508 NA non-coding upstream 90983 111775 ~ 112166 (-)
G68543 NA non-coding upstream 171356 192148 ~ 197284 (-)
G69150 NA other upstream 544671 565463 ~ 566956 (-)
G69161 NA other upstream 566812 587604 ~ 588015 (-)
G69277 NA other upstream 709128 729920 ~ 730465 (-)
G69332 NA other upstream 754572 775364 ~ 775879 (-)

Expression


Co-expression Network