CI01000012_00382850_00384215


Basic Information

Item Value
gene id CI01000012_00382850_00384215
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 381711 ~ 384426 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000012_00382850_00384215.mRNA
ATTGTAATAGTGTCACTGACCTTTGAACAATACCTTCGGGAGGTTCTGTTGAGAATACAGACAGCAGGTCTCTCTCTAAAGCTGAACAAATGTCAGTTCTGTCTAAGTGAGCTCATATTCTTTGGCTACCGTGTCATGCCAGAGGGTATATCCCCAGACCCAGCAAAAGTAAAGGCGGTGGCCGAGTTCAGAACACCAAAGGACACAAAGGATGTCAGAGGACTCCTTGGCCTTACAGGCTATTGCCGATGCTTCATACCTGGCTGGTAAAGCAGAACCACTTTTGCGTCTCACCAGGAAAGAAACACCGTTCTGCTCAGATGAAAGCTGCCAGGCTGCTATGGATTTCTTGACAAAGTGTCTCACATCAGCGCCAATCTTGTGTTTTCCAAATTTCACATGGCCATTCTATATACACACAGACACTTGCGACCTGGGTCTTGGGGTGTCCTTAATGCAAAAAGACGACATGGGACAAGATGTTGTTGTGGCCTTTGCAAGCAGGACTCTACATAAAGCTGAGAAACCCTACTCAGTGCCTGAAAAGGAAAGTTTAGGAGTGATTTGGGCTCTGGAGTACTTTAGACCCTATGTAGAGGGCCACCATGTGATGGACTTTGATTTTAGTATTGTGCATAAGCCAGGTGTTCAAAACAAGGTCCCAGATGCTTTGTCCTGCAACCCAATTCAATGCGAGGCTACCCCAATAGACATTCTGCCAGATTATGCAATCATTGGGGGGATGGATCTCCATAGCCTGTCCTCAATCGTGCTGACAGACAAAGCAAAGTTGAGGCAATTACAGGAAAATTACCTGGTGAATGGAAATGAGTACATTCTTGCATTTGTCGACTACTTCTCAAAGTGGGTAGAAGTAAATGCAGTCAGAACAGCGACAGCGCAAGTTGCTTCAAGTAAATGTCTGAGCGAAATCTTTGCCAGACACAGTGCACCGACTTACCTGATTTCAGACCACGGCGCGCCATTTGTGAGTAACCTCTTCGAGTATGTGGTGGCCACCCTGGGTACAGAACACAGGTTGACTACGGCATATCACCCACAGACAAACGCTACGGAAATGGTGAACCGTACCTTGAAAACAGCCATTCGTGCATATATGGGGGACAAACACACCTCATAGGACAGATACATACCTCAGATTTGTTTCGCTCTTCGTACTGCACCACATGAGAGTACAGACCTGTCACCGTTAATGATGTTATATGAACGTGAGCTTGAGACTCCATTTGATTTGGTCACACAACCGAATGTTGATGGAATGGATAACCCGGATGTGACATAACCAGAGAACTTCAGCGTCTTCCTTACAAGATACTCATGATCATGCCAGAGTAGCTCTAGAGGAAGGACAAAAATATAGGAAATGATACTATGACCTAAAACGGCGTTCAGTTTCTTATGTTGTGGATGATCTAGTTAGAGTGAAAACACACCCAAAGTCTGATGCAATAGCAAACTTTATTCAGCCAAGCTGGCTCCAGTATACTTTGGTCCATGCAGGGTCTCAAAAGTACTGTCTGAAGTTAACTACAGACTGGAAAAAGTTGATACTGGAGATGTTGGTGTGTTTCACGTTGTAAATTTTCAGCCCTTTCACTCATGGTGAAACAAAGGTGTTGATTGTCACTTGTTTATTGACAAATGTTCAAGGTTTGATGTTTTTGAAAAAAAAAAAAAAAAAAAAATCCACAAAAATGTATTCCATATGTGGGTGTTGCACACAGTTGTTTTGTTTTATTGAACTTAAGGGCAATGTGCGGACTTGTAGGACTGTATTGTTTGTGCATTGTTTTTGTTTTTTCTCACCCTGTAACAGCTTTTCAACTGTGGCATGTATGTATGGTTGTTAAGTGAAACAGTAATGCTCCTTGGTTGTGTACGTCTGGGGTCAGCCTTTATTTGACAGGGGGGAATCTGTAACAAGTAGAATTAGGTAGAATTAGGAACACATTCTCTTACTCCCTCACTGATGAGTGGGCAGTCTGTAGAAGGAGCGCGAGCTGTGAACATCGCATGTATGCATGTAAAGCATGTTTATATTGCTCTTTACCCTGTTTTATTTCTGTTCAGTAACGCAGTTGTTAGTGGAGTGTTTTGCAAACTACCCCATGTGTGCATGGGATCAACGACGCTGATTATAAAGAACCACTGTGGAATATCAGATACGAGTCTTTGCTTACACTTGTCTACAAACATTCAGGCAAGCTATCCGGCCTCTCTGTTTAAAGCGTTGCATCTTACACCAGCAACAAAAATAAA

Function

NR:

description
Zgc:162621 protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000012_00382850_00384215.mRNA True 2280 mRNA 0.43 3 381711 384426

Neighbor

gene id symbol gene type direction distance location
CI01000012_00340814_00363240 HAAO coding downstream 18471 340665 ~ 363240 (-)
CI01000012_00260363_00261340 HCAR1-3 coding downstream 120203 260296 ~ 261508 (-)
CI01000012_00223417_00223713 NA coding downstream 157562 223215 ~ 224149 (-)
CI01000012_00178282_00181473 NA coding downstream 198699 178182 ~ 183012 (-)
CI01000012_00176813_00177864 NA coding downstream 203785 176344 ~ 177926 (-)
CI01000012_00427641_00472235 NA coding upstream 43147 427573 ~ 472577 (-)
CI01000012_00520655_00552630 NA coding upstream 135713 520139 ~ 553820 (-)
CI01000012_00647774_00648451 NA coding upstream 263160 647586 ~ 648945 (-)
CI01000012_00686760_00686993 NA coding upstream 302095 686521 ~ 686993 (-)
CI01000012_00689933_00695237 NA coding upstream 304668 689094 ~ 695264 (-)
G68571 NA non-coding downstream 55826 325635 ~ 325885 (-)
G68476 NA non-coding downstream 61369 319929 ~ 320342 (-)
G68569 NA non-coding downstream 61930 319483 ~ 319781 (-)
G68561 NA non-coding downstream 62594 318428 ~ 319117 (-)
G68568 NA non-coding downstream 64543 316940 ~ 317168 (-)
G68582 NA non-coding upstream 7335 391761 ~ 392241 (-)
G68585 NA non-coding upstream 14145 398571 ~ 398906 (-)
G68587 NA non-coding upstream 17104 401530 ~ 408635 (-)
G68588 NA non-coding upstream 28610 413036 ~ 413300 (-)
G68589 NA non-coding upstream 29135 413561 ~ 413889 (-)
G69150 NA other upstream 181037 565463 ~ 566956 (-)
G69161 NA other upstream 203178 587604 ~ 588015 (-)
G69277 NA other upstream 345494 729920 ~ 730465 (-)
G69332 NA other upstream 390938 775364 ~ 775879 (-)
CI01000012_01139864_01192154 TTC7A other upstream 751250 1135676 ~ 1192154 (-)

Expression


Co-expression Network